Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
AP4B1Q9Y6B7 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.64■□□□□ 0.89
AP4B1Q9Y6B7 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
AP4B1Q9Y6B7 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.64■□□□□ 0.89
AP4B1Q9Y6B7 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.64■□□□□ 0.89
AP4B1Q9Y6B7 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
AP4B1Q9Y6B7 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
AP4B1Q9Y6B7 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
AP4B1Q9Y6B7 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
AP4B1Q9Y6B7 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.64■□□□□ 0.89
AP4B1Q9Y6B7 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.64■□□□□ 0.89
AP4B1Q9Y6B7 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
AP4B1Q9Y6B7 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.64■□□□□ 0.89
AP4B1Q9Y6B7 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
AP4B1Q9Y6B7 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
AP4B1Q9Y6B7 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
AP4B1Q9Y6B7 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
AP4B1Q9Y6B7 AC005703.6-201ENST00000623265 1329 ntBASIC20.63■□□□□ 0.89
AP4B1Q9Y6B7 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
AP4B1Q9Y6B7 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.63■□□□□ 0.89
AP4B1Q9Y6B7 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.63■□□□□ 0.89
AP4B1Q9Y6B7 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.63■□□□□ 0.89
AP4B1Q9Y6B7 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
AP4B1Q9Y6B7 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
AP4B1Q9Y6B7 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
AP4B1Q9Y6B7 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
AP4B1Q9Y6B7 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
AP4B1Q9Y6B7 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.62■□□□□ 0.89
AP4B1Q9Y6B7 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
AP4B1Q9Y6B7 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
AP4B1Q9Y6B7 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
AP4B1Q9Y6B7 AC087742.1-201ENST00000575880 1738 ntBASIC20.62■□□□□ 0.89
AP4B1Q9Y6B7 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
AP4B1Q9Y6B7 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.62■□□□□ 0.89
AP4B1Q9Y6B7 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.62■□□□□ 0.89
AP4B1Q9Y6B7 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
AP4B1Q9Y6B7 AL356740.2-201ENST00000601559 647 ntBASIC20.62■□□□□ 0.89
AP4B1Q9Y6B7 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.62■□□□□ 0.89
AP4B1Q9Y6B7 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
AP4B1Q9Y6B7 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.61■□□□□ 0.89
AP4B1Q9Y6B7 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
AP4B1Q9Y6B7 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
AP4B1Q9Y6B7 ALDH1A3-203ENST00000557963 1670 ntBASIC20.61■□□□□ 0.89
AP4B1Q9Y6B7 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
AP4B1Q9Y6B7 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
AP4B1Q9Y6B7 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.61■□□□□ 0.89
AP4B1Q9Y6B7 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.61■□□□□ 0.89
AP4B1Q9Y6B7 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
AP4B1Q9Y6B7 AL117332.1-201ENST00000622628 974 ntBASIC20.61■□□□□ 0.89
AP4B1Q9Y6B7 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.61■□□□□ 0.89
AP4B1Q9Y6B7 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
AP4B1Q9Y6B7 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.61■□□□□ 0.89
AP4B1Q9Y6B7 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.61■□□□□ 0.89
AP4B1Q9Y6B7 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.61■□□□□ 0.89
AP4B1Q9Y6B7 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
AP4B1Q9Y6B7 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
AP4B1Q9Y6B7 LINC01521-201ENST00000504184 1943 ntBASIC20.61■□□□□ 0.89
AP4B1Q9Y6B7 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
AP4B1Q9Y6B7 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
AP4B1Q9Y6B7 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.6■□□□□ 0.89
AP4B1Q9Y6B7 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.6■□□□□ 0.89
AP4B1Q9Y6B7 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
AP4B1Q9Y6B7 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
AP4B1Q9Y6B7 MIR3621-201ENST00000580529 85 ntBASIC20.6■□□□□ 0.89
AP4B1Q9Y6B7 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.6■□□□□ 0.89
AP4B1Q9Y6B7 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.6■□□□□ 0.89
AP4B1Q9Y6B7 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
AP4B1Q9Y6B7 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.6■□□□□ 0.89
AP4B1Q9Y6B7 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
AP4B1Q9Y6B7 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
AP4B1Q9Y6B7 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
AP4B1Q9Y6B7 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.6■□□□□ 0.89
AP4B1Q9Y6B7 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
AP4B1Q9Y6B7 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.6■□□□□ 0.89
AP4B1Q9Y6B7 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
AP4B1Q9Y6B7 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
AP4B1Q9Y6B7 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
AP4B1Q9Y6B7 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
AP4B1Q9Y6B7 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
AP4B1Q9Y6B7 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
AP4B1Q9Y6B7 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.59■□□□□ 0.89
AP4B1Q9Y6B7 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
AP4B1Q9Y6B7 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
AP4B1Q9Y6B7 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
AP4B1Q9Y6B7 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
AP4B1Q9Y6B7 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
AP4B1Q9Y6B7 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
AP4B1Q9Y6B7 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
AP4B1Q9Y6B7 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
AP4B1Q9Y6B7 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
AP4B1Q9Y6B7 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.58■□□□□ 0.89
AP4B1Q9Y6B7 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
AP4B1Q9Y6B7 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
AP4B1Q9Y6B7 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.58■□□□□ 0.88
AP4B1Q9Y6B7 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
AP4B1Q9Y6B7 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
AP4B1Q9Y6B7 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.58■□□□□ 0.88
AP4B1Q9Y6B7 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
AP4B1Q9Y6B7 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
AP4B1Q9Y6B7 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms