Protein–RNA interactions for Protein: Q9Y5H5

PCDHA9, Protocadherin alpha-9, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9Q9Y5H5 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHA9Q9Y5H5 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHA9Q9Y5H5 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHA9Q9Y5H5 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.78■□□□□ 0.92
PCDHA9Q9Y5H5 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHA9Q9Y5H5 AL136116.3-201ENST00000402907 1138 ntBASIC20.78■□□□□ 0.92
PCDHA9Q9Y5H5 DUX4L19-201ENST00000557448 1267 ntBASIC20.78■□□□□ 0.92
PCDHA9Q9Y5H5 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHA9Q9Y5H5 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.78■□□□□ 0.92
PCDHA9Q9Y5H5 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.78■□□□□ 0.92
PCDHA9Q9Y5H5 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.78■□□□□ 0.92
PCDHA9Q9Y5H5 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCDHA9Q9Y5H5 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCDHA9Q9Y5H5 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.77■□□□□ 0.92
PCDHA9Q9Y5H5 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.77■□□□□ 0.92
PCDHA9Q9Y5H5 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
PCDHA9Q9Y5H5 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.77■□□□□ 0.92
PCDHA9Q9Y5H5 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
PCDHA9Q9Y5H5 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.77■□□□□ 0.92
PCDHA9Q9Y5H5 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
PCDHA9Q9Y5H5 SYT6-210ENST00000641643 1587 ntBASIC20.76■□□□□ 0.91
PCDHA9Q9Y5H5 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.76■□□□□ 0.91
PCDHA9Q9Y5H5 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHA9Q9Y5H5 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
PCDHA9Q9Y5H5 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHA9Q9Y5H5 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHA9Q9Y5H5 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.76■□□□□ 0.91
PCDHA9Q9Y5H5 SERBP1P1-201ENST00000396021 1160 ntBASIC20.76■□□□□ 0.91
PCDHA9Q9Y5H5 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.76■□□□□ 0.91
PCDHA9Q9Y5H5 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHA9Q9Y5H5 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.76■□□□□ 0.91
PCDHA9Q9Y5H5 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHA9Q9Y5H5 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHA9Q9Y5H5 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.76■□□□□ 0.91
PCDHA9Q9Y5H5 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHA9Q9Y5H5 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.76■□□□□ 0.91
PCDHA9Q9Y5H5 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHA9Q9Y5H5 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHA9Q9Y5H5 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.75■□□□□ 0.91
PCDHA9Q9Y5H5 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHA9Q9Y5H5 AC005229.4-201ENST00000610085 2198 ntBASIC20.75■□□□□ 0.91
PCDHA9Q9Y5H5 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHA9Q9Y5H5 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.75■□□□□ 0.91
PCDHA9Q9Y5H5 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHA9Q9Y5H5 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
PCDHA9Q9Y5H5 AL138724.1-201ENST00000606771 1088 ntBASIC20.75■□□□□ 0.91
PCDHA9Q9Y5H5 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
PCDHA9Q9Y5H5 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.75■□□□□ 0.91
PCDHA9Q9Y5H5 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHA9Q9Y5H5 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
PCDHA9Q9Y5H5 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHA9Q9Y5H5 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
PCDHA9Q9Y5H5 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
PCDHA9Q9Y5H5 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHA9Q9Y5H5 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.74■□□□□ 0.91
PCDHA9Q9Y5H5 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHA9Q9Y5H5 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHA9Q9Y5H5 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHA9Q9Y5H5 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHA9Q9Y5H5 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHA9Q9Y5H5 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.74■□□□□ 0.91
PCDHA9Q9Y5H5 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.74■□□□□ 0.91
PCDHA9Q9Y5H5 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
PCDHA9Q9Y5H5 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
PCDHA9Q9Y5H5 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.74■□□□□ 0.91
PCDHA9Q9Y5H5 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
PCDHA9Q9Y5H5 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHA9Q9Y5H5 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.73■□□□□ 0.91
PCDHA9Q9Y5H5 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHA9Q9Y5H5 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.73■□□□□ 0.91
PCDHA9Q9Y5H5 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHA9Q9Y5H5 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
PCDHA9Q9Y5H5 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHA9Q9Y5H5 AC244015.2-201ENST00000616358 1861 ntBASIC20.73■□□□□ 0.91
PCDHA9Q9Y5H5 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.73■□□□□ 0.91
PCDHA9Q9Y5H5 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHA9Q9Y5H5 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.72■□□□□ 0.91
PCDHA9Q9Y5H5 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.72■□□□□ 0.91
PCDHA9Q9Y5H5 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHA9Q9Y5H5 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHA9Q9Y5H5 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHA9Q9Y5H5 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.72■□□□□ 0.91
PCDHA9Q9Y5H5 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.72■□□□□ 0.91
PCDHA9Q9Y5H5 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.72■□□□□ 0.91
PCDHA9Q9Y5H5 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
PCDHA9Q9Y5H5 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHA9Q9Y5H5 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.72■□□□□ 0.91
PCDHA9Q9Y5H5 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.72■□□□□ 0.91
PCDHA9Q9Y5H5 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHA9Q9Y5H5 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.72■□□□□ 0.91
PCDHA9Q9Y5H5 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHA9Q9Y5H5 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHA9Q9Y5H5 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
PCDHA9Q9Y5H5 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.71■□□□□ 0.91
PCDHA9Q9Y5H5 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHA9Q9Y5H5 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.71■□□□□ 0.91
PCDHA9Q9Y5H5 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHA9Q9Y5H5 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
PCDHA9Q9Y5H5 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
PCDHA9Q9Y5H5 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms