Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
PCDHGA11Q9Y5H2 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHGA11Q9Y5H2 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHGA11Q9Y5H2 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHGA11Q9Y5H2 AC087239.1-201ENST00000622671 572 ntBASIC20.93■□□□□ 0.94
PCDHGA11Q9Y5H2 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHGA11Q9Y5H2 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHGA11Q9Y5H2 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHGA11Q9Y5H2 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.92■□□□□ 0.94
PCDHGA11Q9Y5H2 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.92■□□□□ 0.94
PCDHGA11Q9Y5H2 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHGA11Q9Y5H2 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.92■□□□□ 0.94
PCDHGA11Q9Y5H2 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
PCDHGA11Q9Y5H2 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
PCDHGA11Q9Y5H2 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.92■□□□□ 0.94
PCDHGA11Q9Y5H2 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHGA11Q9Y5H2 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.92■□□□□ 0.94
PCDHGA11Q9Y5H2 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.92■□□□□ 0.94
PCDHGA11Q9Y5H2 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHGA11Q9Y5H2 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHGA11Q9Y5H2 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHGA11Q9Y5H2 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHGA11Q9Y5H2 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHGA11Q9Y5H2 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHGA11Q9Y5H2 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHGA11Q9Y5H2 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHGA11Q9Y5H2 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHGA11Q9Y5H2 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
PCDHGA11Q9Y5H2 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.91■□□□□ 0.94
PCDHGA11Q9Y5H2 AC079089.2-201ENST00000531211 1277 ntBASIC20.91■□□□□ 0.94
PCDHGA11Q9Y5H2 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.91■□□□□ 0.94
PCDHGA11Q9Y5H2 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.91■□□□□ 0.94
PCDHGA11Q9Y5H2 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.91■□□□□ 0.94
PCDHGA11Q9Y5H2 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.91■□□□□ 0.94
PCDHGA11Q9Y5H2 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.91■□□□□ 0.94
PCDHGA11Q9Y5H2 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHGA11Q9Y5H2 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHGA11Q9Y5H2 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHGA11Q9Y5H2 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHGA11Q9Y5H2 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHGA11Q9Y5H2 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.9■□□□□ 0.94
PCDHGA11Q9Y5H2 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.9■□□□□ 0.94
PCDHGA11Q9Y5H2 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHGA11Q9Y5H2 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHGA11Q9Y5H2 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
PCDHGA11Q9Y5H2 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.9■□□□□ 0.94
PCDHGA11Q9Y5H2 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHGA11Q9Y5H2 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHGA11Q9Y5H2 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHGA11Q9Y5H2 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
PCDHGA11Q9Y5H2 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
PCDHGA11Q9Y5H2 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
PCDHGA11Q9Y5H2 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
PCDHGA11Q9Y5H2 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
PCDHGA11Q9Y5H2 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PCDHGA11Q9Y5H2 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
PCDHGA11Q9Y5H2 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PCDHGA11Q9Y5H2 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PCDHGA11Q9Y5H2 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PCDHGA11Q9Y5H2 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PCDHGA11Q9Y5H2 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.89■□□□□ 0.93
PCDHGA11Q9Y5H2 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PCDHGA11Q9Y5H2 AC010525.1-201ENST00000585559 441 ntBASIC20.89■□□□□ 0.93
PCDHGA11Q9Y5H2 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PCDHGA11Q9Y5H2 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PCDHGA11Q9Y5H2 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PCDHGA11Q9Y5H2 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PCDHGA11Q9Y5H2 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
PCDHGA11Q9Y5H2 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PCDHGA11Q9Y5H2 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.88■□□□□ 0.93
PCDHGA11Q9Y5H2 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
PCDHGA11Q9Y5H2 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHGA11Q9Y5H2 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHGA11Q9Y5H2 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHGA11Q9Y5H2 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
PCDHGA11Q9Y5H2 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHGA11Q9Y5H2 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
PCDHGA11Q9Y5H2 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHGA11Q9Y5H2 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHGA11Q9Y5H2 AC010141.3-201ENST00000456659 717 ntBASIC20.88■□□□□ 0.93
PCDHGA11Q9Y5H2 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
PCDHGA11Q9Y5H2 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHGA11Q9Y5H2 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.88■□□□□ 0.93
PCDHGA11Q9Y5H2 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.88■□□□□ 0.93
PCDHGA11Q9Y5H2 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHGA11Q9Y5H2 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.87■□□□□ 0.93
PCDHGA11Q9Y5H2 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHGA11Q9Y5H2 AC008406.3-201ENST00000620001 1374 ntBASIC20.87■□□□□ 0.93
PCDHGA11Q9Y5H2 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHGA11Q9Y5H2 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHGA11Q9Y5H2 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHGA11Q9Y5H2 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.87■□□□□ 0.93
PCDHGA11Q9Y5H2 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHGA11Q9Y5H2 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHGA11Q9Y5H2 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHGA11Q9Y5H2 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHGA11Q9Y5H2 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHGA11Q9Y5H2 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHGA11Q9Y5H2 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
PCDHGA11Q9Y5H2 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms