Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHGA4Q9Y5G9 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
PCDHGA4Q9Y5G9 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC21.19■□□□□ 0.98
PCDHGA4Q9Y5G9 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
PCDHGA4Q9Y5G9 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
PCDHGA4Q9Y5G9 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHGA4Q9Y5G9 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
PCDHGA4Q9Y5G9 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHGA4Q9Y5G9 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHGA4Q9Y5G9 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHGA4Q9Y5G9 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHGA4Q9Y5G9 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHGA4Q9Y5G9 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHGA4Q9Y5G9 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.18■□□□□ 0.98
PCDHGA4Q9Y5G9 AL391422.3-201ENST00000603791 2761 ntBASIC21.18■□□□□ 0.98
PCDHGA4Q9Y5G9 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHGA4Q9Y5G9 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHGA4Q9Y5G9 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHGA4Q9Y5G9 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC21.18■□□□□ 0.98
PCDHGA4Q9Y5G9 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC21.18■□□□□ 0.98
PCDHGA4Q9Y5G9 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
PCDHGA4Q9Y5G9 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHGA4Q9Y5G9 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHGA4Q9Y5G9 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHGA4Q9Y5G9 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC21.18■□□□□ 0.98
PCDHGA4Q9Y5G9 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.17■□□□□ 0.98
PCDHGA4Q9Y5G9 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHGA4Q9Y5G9 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
PCDHGA4Q9Y5G9 AC027612.3-201ENST00000413684 1047 ntBASIC21.17■□□□□ 0.98
PCDHGA4Q9Y5G9 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC21.17■□□□□ 0.98
PCDHGA4Q9Y5G9 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC21.17■□□□□ 0.98
PCDHGA4Q9Y5G9 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC21.17■□□□□ 0.98
PCDHGA4Q9Y5G9 AL358852.1-201ENST00000623174 1268 ntBASIC21.17■□□□□ 0.98
PCDHGA4Q9Y5G9 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.17■□□□□ 0.98
PCDHGA4Q9Y5G9 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.17■□□□□ 0.98
PCDHGA4Q9Y5G9 AC004687.1-201ENST00000579003 1625 ntBASIC21.17■□□□□ 0.98
PCDHGA4Q9Y5G9 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHGA4Q9Y5G9 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.17■□□□□ 0.98
PCDHGA4Q9Y5G9 AF106564.1-201ENST00000607058 2553 ntBASIC21.16■□□□□ 0.98
PCDHGA4Q9Y5G9 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC21.16■□□□□ 0.98
PCDHGA4Q9Y5G9 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCDHGA4Q9Y5G9 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PCDHGA4Q9Y5G9 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC21.16■□□□□ 0.98
PCDHGA4Q9Y5G9 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC21.16■□□□□ 0.98
PCDHGA4Q9Y5G9 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
PCDHGA4Q9Y5G9 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC21.16■□□□□ 0.98
PCDHGA4Q9Y5G9 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC21.16■□□□□ 0.98
PCDHGA4Q9Y5G9 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC21.16■□□□□ 0.98
PCDHGA4Q9Y5G9 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
PCDHGA4Q9Y5G9 AICDA-202ENST00000537228 667 ntTSL 5 BASIC21.16■□□□□ 0.98
PCDHGA4Q9Y5G9 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
PCDHGA4Q9Y5G9 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PCDHGA4Q9Y5G9 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC21.16■□□□□ 0.98
PCDHGA4Q9Y5G9 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
PCDHGA4Q9Y5G9 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCDHGA4Q9Y5G9 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCDHGA4Q9Y5G9 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
PCDHGA4Q9Y5G9 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCDHGA4Q9Y5G9 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHGA4Q9Y5G9 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHGA4Q9Y5G9 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHGA4Q9Y5G9 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHGA4Q9Y5G9 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC21.15■□□□□ 0.98
PCDHGA4Q9Y5G9 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHGA4Q9Y5G9 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC21.15■□□□□ 0.98
PCDHGA4Q9Y5G9 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHGA4Q9Y5G9 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHGA4Q9Y5G9 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHGA4Q9Y5G9 AC004911.1-201ENST00000416316 871 ntBASIC21.15■□□□□ 0.98
PCDHGA4Q9Y5G9 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC21.15■□□□□ 0.98
PCDHGA4Q9Y5G9 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC21.15■□□□□ 0.98
PCDHGA4Q9Y5G9 AC123595.1-201ENST00000440769 1046 ntBASIC21.15■□□□□ 0.98
PCDHGA4Q9Y5G9 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHGA4Q9Y5G9 AC092667.1-201ENST00000434301 2586 ntBASIC21.15■□□□□ 0.98
PCDHGA4Q9Y5G9 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHGA4Q9Y5G9 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21.15■□□□□ 0.98
PCDHGA4Q9Y5G9 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC21.14■□□□□ 0.98
PCDHGA4Q9Y5G9 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC21.14■□□□□ 0.98
PCDHGA4Q9Y5G9 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
PCDHGA4Q9Y5G9 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC21.14■□□□□ 0.98
PCDHGA4Q9Y5G9 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
PCDHGA4Q9Y5G9 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PCDHGA4Q9Y5G9 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC21.14■□□□□ 0.97
PCDHGA4Q9Y5G9 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC21.14■□□□□ 0.97
PCDHGA4Q9Y5G9 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC21.14■□□□□ 0.97
PCDHGA4Q9Y5G9 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC21.14■□□□□ 0.97
PCDHGA4Q9Y5G9 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
PCDHGA4Q9Y5G9 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PCDHGA4Q9Y5G9 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.14■□□□□ 0.97
PCDHGA4Q9Y5G9 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.14■□□□□ 0.97
PCDHGA4Q9Y5G9 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC21.13■□□□□ 0.97
PCDHGA4Q9Y5G9 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
PCDHGA4Q9Y5G9 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC21.13■□□□□ 0.97
PCDHGA4Q9Y5G9 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC21.13■□□□□ 0.97
PCDHGA4Q9Y5G9 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21.13■□□□□ 0.97
PCDHGA4Q9Y5G9 DLX3-202ENST00000512495 834 ntTSL 2 BASIC21.13■□□□□ 0.97
PCDHGA4Q9Y5G9 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
PCDHGA4Q9Y5G9 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHGA4Q9Y5G9 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
PCDHGA4Q9Y5G9 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 232 ms