Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
AP4S1Q9Y587 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
AP4S1Q9Y587 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
AP4S1Q9Y587 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
AP4S1Q9Y587 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
AP4S1Q9Y587 FP325331.1-202ENST00000623531 1380 ntBASIC20.38■□□□□ 0.85
AP4S1Q9Y587 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
AP4S1Q9Y587 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
AP4S1Q9Y587 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
AP4S1Q9Y587 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
AP4S1Q9Y587 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
AP4S1Q9Y587 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
AP4S1Q9Y587 LINC01006-201ENST00000333319 2292 ntBASIC20.38■□□□□ 0.85
AP4S1Q9Y587 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
AP4S1Q9Y587 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
AP4S1Q9Y587 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
AP4S1Q9Y587 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
AP4S1Q9Y587 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC20.37■□□□□ 0.85
AP4S1Q9Y587 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.37■□□□□ 0.85
AP4S1Q9Y587 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
AP4S1Q9Y587 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
AP4S1Q9Y587 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
AP4S1Q9Y587 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
AP4S1Q9Y587 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
AP4S1Q9Y587 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
AP4S1Q9Y587 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC20.37■□□□□ 0.85
AP4S1Q9Y587 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
AP4S1Q9Y587 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
AP4S1Q9Y587 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
AP4S1Q9Y587 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
AP4S1Q9Y587 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.36■□□□□ 0.85
AP4S1Q9Y587 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
AP4S1Q9Y587 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
AP4S1Q9Y587 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
AP4S1Q9Y587 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.36■□□□□ 0.85
AP4S1Q9Y587 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
AP4S1Q9Y587 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
AP4S1Q9Y587 MIR7108-201ENST00000614319 87 ntBASIC20.36■□□□□ 0.85
AP4S1Q9Y587 AC009086.3-201ENST00000623486 1008 ntBASIC20.36■□□□□ 0.85
AP4S1Q9Y587 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
AP4S1Q9Y587 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
AP4S1Q9Y587 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
AP4S1Q9Y587 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
AP4S1Q9Y587 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.35■□□□□ 0.85
AP4S1Q9Y587 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
AP4S1Q9Y587 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.35■□□□□ 0.85
AP4S1Q9Y587 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
AP4S1Q9Y587 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
AP4S1Q9Y587 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
AP4S1Q9Y587 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
AP4S1Q9Y587 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
AP4S1Q9Y587 AC120024.1-201ENST00000562672 995 ntBASIC20.35■□□□□ 0.85
AP4S1Q9Y587 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
AP4S1Q9Y587 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
AP4S1Q9Y587 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
AP4S1Q9Y587 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
AP4S1Q9Y587 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
AP4S1Q9Y587 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.34■□□□□ 0.85
AP4S1Q9Y587 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.34■□□□□ 0.85
AP4S1Q9Y587 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.34■□□□□ 0.85
AP4S1Q9Y587 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
AP4S1Q9Y587 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.34■□□□□ 0.85
AP4S1Q9Y587 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
AP4S1Q9Y587 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
AP4S1Q9Y587 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.34■□□□□ 0.85
AP4S1Q9Y587 AC019171.1-201ENST00000601251 1056 ntBASIC20.34■□□□□ 0.85
AP4S1Q9Y587 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
AP4S1Q9Y587 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
AP4S1Q9Y587 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
AP4S1Q9Y587 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
AP4S1Q9Y587 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
AP4S1Q9Y587 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
AP4S1Q9Y587 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
AP4S1Q9Y587 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.34■□□□□ 0.85
AP4S1Q9Y587 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.34■□□□□ 0.85
AP4S1Q9Y587 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
AP4S1Q9Y587 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
AP4S1Q9Y587 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
AP4S1Q9Y587 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
AP4S1Q9Y587 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.33■□□□□ 0.85
AP4S1Q9Y587 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
AP4S1Q9Y587 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
AP4S1Q9Y587 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
AP4S1Q9Y587 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
AP4S1Q9Y587 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.33■□□□□ 0.84
AP4S1Q9Y587 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
AP4S1Q9Y587 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
AP4S1Q9Y587 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.32■□□□□ 0.84
AP4S1Q9Y587 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC20.32■□□□□ 0.84
AP4S1Q9Y587 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
AP4S1Q9Y587 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.32■□□□□ 0.84
AP4S1Q9Y587 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
AP4S1Q9Y587 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
AP4S1Q9Y587 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
AP4S1Q9Y587 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC20.32■□□□□ 0.84
AP4S1Q9Y587 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.32■□□□□ 0.84
AP4S1Q9Y587 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
AP4S1Q9Y587 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
AP4S1Q9Y587 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
AP4S1Q9Y587 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms