Protein–RNA interactions for Protein: Q9Y4Y9

LSM5, U6 snRNA-associated Sm-like protein LSm5, humanhuman

Known RBP Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5Q9Y4Y9 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
LSM5Q9Y4Y9 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
LSM5Q9Y4Y9 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
LSM5Q9Y4Y9 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LSM5Q9Y4Y9 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LSM5Q9Y4Y9 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
LSM5Q9Y4Y9 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LSM5Q9Y4Y9 ME2-206ENST00000638410 2289 ntTSL 5 BASIC17.76■□□□□ 0.43
LSM5Q9Y4Y9 ME2-210ENST00000639255 2262 ntTSL 5 BASIC17.76■□□□□ 0.43
LSM5Q9Y4Y9 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
LSM5Q9Y4Y9 MIR639-201ENST00000384974 98 ntBASIC17.76■□□□□ 0.43
LSM5Q9Y4Y9 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC17.76■□□□□ 0.43
LSM5Q9Y4Y9 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC17.76■□□□□ 0.43
LSM5Q9Y4Y9 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
LSM5Q9Y4Y9 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
LSM5Q9Y4Y9 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LSM5Q9Y4Y9 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC17.75■□□□□ 0.43
LSM5Q9Y4Y9 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC17.75■□□□□ 0.43
LSM5Q9Y4Y9 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC17.75■□□□□ 0.43
LSM5Q9Y4Y9 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LSM5Q9Y4Y9 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LSM5Q9Y4Y9 GOLGA2P6-201ENST00000340929 2049 ntBASIC17.75■□□□□ 0.43
LSM5Q9Y4Y9 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LSM5Q9Y4Y9 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
LSM5Q9Y4Y9 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
LSM5Q9Y4Y9 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LSM5Q9Y4Y9 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LSM5Q9Y4Y9 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LSM5Q9Y4Y9 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LSM5Q9Y4Y9 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
LSM5Q9Y4Y9 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LSM5Q9Y4Y9 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC17.74■□□□□ 0.43
LSM5Q9Y4Y9 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
LSM5Q9Y4Y9 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
LSM5Q9Y4Y9 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LSM5Q9Y4Y9 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC17.74■□□□□ 0.43
LSM5Q9Y4Y9 FEM1AP4-201ENST00000443167 1987 ntBASIC17.74■□□□□ 0.43
LSM5Q9Y4Y9 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC17.74■□□□□ 0.43
LSM5Q9Y4Y9 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
LSM5Q9Y4Y9 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LSM5Q9Y4Y9 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
LSM5Q9Y4Y9 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LSM5Q9Y4Y9 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LSM5Q9Y4Y9 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
LSM5Q9Y4Y9 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LSM5Q9Y4Y9 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
LSM5Q9Y4Y9 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LSM5Q9Y4Y9 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LSM5Q9Y4Y9 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LSM5Q9Y4Y9 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LSM5Q9Y4Y9 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC17.73■□□□□ 0.43
LSM5Q9Y4Y9 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LSM5Q9Y4Y9 DUX4L9-201ENST00000449051 1259 ntBASIC17.73■□□□□ 0.43
LSM5Q9Y4Y9 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC17.73■□□□□ 0.43
LSM5Q9Y4Y9 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LSM5Q9Y4Y9 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
LSM5Q9Y4Y9 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
LSM5Q9Y4Y9 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
LSM5Q9Y4Y9 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LSM5Q9Y4Y9 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
LSM5Q9Y4Y9 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.72■□□□□ 0.43
LSM5Q9Y4Y9 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC17.72■□□□□ 0.43
LSM5Q9Y4Y9 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LSM5Q9Y4Y9 TUB-203ENST00000534099 1759 ntTSL 2 BASIC17.72■□□□□ 0.43
LSM5Q9Y4Y9 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LSM5Q9Y4Y9 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC17.72■□□□□ 0.43
LSM5Q9Y4Y9 AC004448.1-201ENST00000458332 883 ntBASIC17.72■□□□□ 0.43
LSM5Q9Y4Y9 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LSM5Q9Y4Y9 RPS2-202ENST00000526522 924 ntTSL 2 BASIC17.72■□□□□ 0.43
LSM5Q9Y4Y9 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC17.72■□□□□ 0.43
LSM5Q9Y4Y9 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC17.72■□□□□ 0.43
LSM5Q9Y4Y9 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LSM5Q9Y4Y9 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LSM5Q9Y4Y9 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
LSM5Q9Y4Y9 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LSM5Q9Y4Y9 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC17.72■□□□□ 0.43
LSM5Q9Y4Y9 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC17.71■□□□□ 0.43
LSM5Q9Y4Y9 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC17.71■□□□□ 0.43
LSM5Q9Y4Y9 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LSM5Q9Y4Y9 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
LSM5Q9Y4Y9 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
LSM5Q9Y4Y9 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LSM5Q9Y4Y9 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LSM5Q9Y4Y9 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LSM5Q9Y4Y9 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LSM5Q9Y4Y9 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LSM5Q9Y4Y9 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LSM5Q9Y4Y9 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LSM5Q9Y4Y9 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LSM5Q9Y4Y9 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
LSM5Q9Y4Y9 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC17.71■□□□□ 0.42
LSM5Q9Y4Y9 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC17.71■□□□□ 0.42
LSM5Q9Y4Y9 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LSM5Q9Y4Y9 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LSM5Q9Y4Y9 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
LSM5Q9Y4Y9 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LSM5Q9Y4Y9 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LSM5Q9Y4Y9 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
LSM5Q9Y4Y9 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LSM5Q9Y4Y9 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms