Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
ZC3H4Q9UPT8 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC26.43■■□□□ 1.82
ZC3H4Q9UPT8 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
ZC3H4Q9UPT8 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC26.43■■□□□ 1.82
ZC3H4Q9UPT8 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
ZC3H4Q9UPT8 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC26.43■■□□□ 1.82
ZC3H4Q9UPT8 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC26.43■■□□□ 1.82
ZC3H4Q9UPT8 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC26.42■■□□□ 1.82
ZC3H4Q9UPT8 UQCRFS1P1-201ENST00000435169 820 ntBASIC26.42■■□□□ 1.82
ZC3H4Q9UPT8 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC26.42■■□□□ 1.82
ZC3H4Q9UPT8 SERP1-208ENST00000491660 830 ntTSL 2 BASIC26.42■■□□□ 1.82
ZC3H4Q9UPT8 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC26.42■■□□□ 1.82
ZC3H4Q9UPT8 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC26.42■■□□□ 1.82
ZC3H4Q9UPT8 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
ZC3H4Q9UPT8 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
ZC3H4Q9UPT8 TMEM202-AS1-202ENST00000565181 2325 ntBASIC26.42■■□□□ 1.82
ZC3H4Q9UPT8 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
ZC3H4Q9UPT8 AC004687.1-201ENST00000579003 1625 ntBASIC26.42■■□□□ 1.82
ZC3H4Q9UPT8 MMAB-206ENST00000540016 945 ntTSL 3 BASIC26.41■■□□□ 1.82
ZC3H4Q9UPT8 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC26.41■■□□□ 1.82
ZC3H4Q9UPT8 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC26.41■■□□□ 1.82
ZC3H4Q9UPT8 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
ZC3H4Q9UPT8 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC26.4■■□□□ 1.82
ZC3H4Q9UPT8 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC26.4■■□□□ 1.82
ZC3H4Q9UPT8 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
ZC3H4Q9UPT8 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC26.4■■□□□ 1.82
ZC3H4Q9UPT8 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
ZC3H4Q9UPT8 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC26.4■■□□□ 1.82
ZC3H4Q9UPT8 AC138907.5-202ENST00000569484 235 ntBASIC26.4■■□□□ 1.82
ZC3H4Q9UPT8 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC26.4■■□□□ 1.82
ZC3H4Q9UPT8 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
ZC3H4Q9UPT8 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC26.4■■□□□ 1.82
ZC3H4Q9UPT8 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC26.4■■□□□ 1.82
ZC3H4Q9UPT8 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC26.39■■□□□ 1.82
ZC3H4Q9UPT8 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC26.39■■□□□ 1.82
ZC3H4Q9UPT8 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC26.39■■□□□ 1.82
ZC3H4Q9UPT8 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC26.39■■□□□ 1.82
ZC3H4Q9UPT8 AC008550.1-201ENST00000511500 884 ntBASIC26.39■■□□□ 1.82
ZC3H4Q9UPT8 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC26.39■■□□□ 1.82
ZC3H4Q9UPT8 USP36-216ENST00000589424 970 ntTSL 5 BASIC26.39■■□□□ 1.82
ZC3H4Q9UPT8 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC26.39■■□□□ 1.81
ZC3H4Q9UPT8 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC26.39■■□□□ 1.81
ZC3H4Q9UPT8 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
ZC3H4Q9UPT8 TERF1P5-201ENST00000477545 1207 ntBASIC26.39■■□□□ 1.81
ZC3H4Q9UPT8 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC26.39■■□□□ 1.81
ZC3H4Q9UPT8 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC26.39■■□□□ 1.81
ZC3H4Q9UPT8 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC26.39■■□□□ 1.81
ZC3H4Q9UPT8 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC26.38■■□□□ 1.81
ZC3H4Q9UPT8 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC26.38■■□□□ 1.81
ZC3H4Q9UPT8 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC26.38■■□□□ 1.81
ZC3H4Q9UPT8 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
ZC3H4Q9UPT8 AC097658.1-201ENST00000475555 843 ntBASIC26.38■■□□□ 1.81
ZC3H4Q9UPT8 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC26.38■■□□□ 1.81
ZC3H4Q9UPT8 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC26.38■■□□□ 1.81
ZC3H4Q9UPT8 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
ZC3H4Q9UPT8 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
ZC3H4Q9UPT8 DUSP8P4-201ENST00000399538 1761 ntBASIC26.37■■□□□ 1.81
ZC3H4Q9UPT8 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
ZC3H4Q9UPT8 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
ZC3H4Q9UPT8 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
ZC3H4Q9UPT8 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
ZC3H4Q9UPT8 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC26.37■■□□□ 1.81
ZC3H4Q9UPT8 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
ZC3H4Q9UPT8 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC26.37■■□□□ 1.81
ZC3H4Q9UPT8 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC26.37■■□□□ 1.81
ZC3H4Q9UPT8 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC26.37■■□□□ 1.81
ZC3H4Q9UPT8 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
ZC3H4Q9UPT8 EI24-213ENST00000618552 1747 ntTSL 5 BASIC26.37■■□□□ 1.81
ZC3H4Q9UPT8 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC26.36■■□□□ 1.81
ZC3H4Q9UPT8 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC26.36■■□□□ 1.81
ZC3H4Q9UPT8 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC26.36■■□□□ 1.81
ZC3H4Q9UPT8 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
ZC3H4Q9UPT8 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC26.36■■□□□ 1.81
ZC3H4Q9UPT8 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
ZC3H4Q9UPT8 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC26.36■■□□□ 1.81
ZC3H4Q9UPT8 MIR1224-201ENST00000408193 85 ntBASIC26.36■■□□□ 1.81
ZC3H4Q9UPT8 FAM210CP-201ENST00000445714 574 ntBASIC26.36■■□□□ 1.81
ZC3H4Q9UPT8 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
ZC3H4Q9UPT8 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC26.36■■□□□ 1.81
ZC3H4Q9UPT8 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
ZC3H4Q9UPT8 AC020928.2-201ENST00000588717 2197 ntBASIC26.35■■□□□ 1.81
ZC3H4Q9UPT8 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
ZC3H4Q9UPT8 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC26.35■■□□□ 1.81
ZC3H4Q9UPT8 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
ZC3H4Q9UPT8 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
ZC3H4Q9UPT8 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC26.35■■□□□ 1.81
ZC3H4Q9UPT8 AC069236.1-201ENST00000604339 616 ntBASIC26.35■■□□□ 1.81
ZC3H4Q9UPT8 AC008694.1-202ENST00000636953 945 ntBASIC26.35■■□□□ 1.81
ZC3H4Q9UPT8 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC26.35■■□□□ 1.81
ZC3H4Q9UPT8 USP45-205ENST00000472914 1617 ntTSL 5 BASIC26.34■■□□□ 1.81
ZC3H4Q9UPT8 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC26.34■■□□□ 1.81
ZC3H4Q9UPT8 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
ZC3H4Q9UPT8 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC26.34■■□□□ 1.81
ZC3H4Q9UPT8 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC26.34■■□□□ 1.81
ZC3H4Q9UPT8 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
ZC3H4Q9UPT8 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC26.34■■□□□ 1.81
ZC3H4Q9UPT8 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC26.34■■□□□ 1.81
ZC3H4Q9UPT8 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC26.34■■□□□ 1.81
ZC3H4Q9UPT8 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC26.34■■□□□ 1.81
ZC3H4Q9UPT8 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC26.33■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms