Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC9.1□□□□□ -0.95
MACF1Q9UPN3 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC9.1□□□□□ -0.95
MACF1Q9UPN3 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC9.1□□□□□ -0.95
MACF1Q9UPN3 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
MACF1Q9UPN3 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
MACF1Q9UPN3 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC9.1□□□□□ -0.95
MACF1Q9UPN3 KRT18P57-201ENST00000443599 1254 ntBASIC9.1□□□□□ -0.95
MACF1Q9UPN3 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC9.1□□□□□ -0.95
MACF1Q9UPN3 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC9.1□□□□□ -0.95
MACF1Q9UPN3 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC9.1□□□□□ -0.95
MACF1Q9UPN3 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC9.1□□□□□ -0.95
MACF1Q9UPN3 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
MACF1Q9UPN3 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
MACF1Q9UPN3 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
MACF1Q9UPN3 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC9.1□□□□□ -0.95
MACF1Q9UPN3 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
MACF1Q9UPN3 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
MACF1Q9UPN3 SERPINH1P1-201ENST00000419794 1249 ntBASIC9.09□□□□□ -0.95
MACF1Q9UPN3 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC9.09□□□□□ -0.95
MACF1Q9UPN3 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC9.09□□□□□ -0.95
MACF1Q9UPN3 SHF-207ENST00000560540 2062 ntTSL 5 BASIC9.09□□□□□ -0.95
MACF1Q9UPN3 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC9.09□□□□□ -0.95
MACF1Q9UPN3 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
MACF1Q9UPN3 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
MACF1Q9UPN3 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC9.09□□□□□ -0.95
MACF1Q9UPN3 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
MACF1Q9UPN3 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
MACF1Q9UPN3 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
MACF1Q9UPN3 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
MACF1Q9UPN3 LINC01003-201ENST00000564834 1764 ntBASIC9.09□□□□□ -0.95
MACF1Q9UPN3 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC9.09□□□□□ -0.95
MACF1Q9UPN3 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
MACF1Q9UPN3 AL355075.4-201ENST00000554988 638 ntBASIC9.09□□□□□ -0.95
MACF1Q9UPN3 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
MACF1Q9UPN3 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
MACF1Q9UPN3 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC9.09□□□□□ -0.95
MACF1Q9UPN3 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
MACF1Q9UPN3 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
MACF1Q9UPN3 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC9.09□□□□□ -0.95
MACF1Q9UPN3 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC9.09□□□□□ -0.95
MACF1Q9UPN3 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
MACF1Q9UPN3 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
MACF1Q9UPN3 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC9.09□□□□□ -0.95
MACF1Q9UPN3 AP003071.4-201ENST00000562276 1284 ntBASIC9.09□□□□□ -0.95
MACF1Q9UPN3 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
MACF1Q9UPN3 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC9.09□□□□□ -0.95
MACF1Q9UPN3 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
MACF1Q9UPN3 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
MACF1Q9UPN3 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
MACF1Q9UPN3 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
MACF1Q9UPN3 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC9.08□□□□□ -0.96
MACF1Q9UPN3 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC9.08□□□□□ -0.96
MACF1Q9UPN3 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC9.08□□□□□ -0.96
MACF1Q9UPN3 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
MACF1Q9UPN3 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC9.08□□□□□ -0.96
MACF1Q9UPN3 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
MACF1Q9UPN3 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
MACF1Q9UPN3 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC9.08□□□□□ -0.96
MACF1Q9UPN3 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
MACF1Q9UPN3 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC9.08□□□□□ -0.96
MACF1Q9UPN3 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC9.08□□□□□ -0.96
MACF1Q9UPN3 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC9.08□□□□□ -0.96
MACF1Q9UPN3 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC9.08□□□□□ -0.96
MACF1Q9UPN3 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC9.08□□□□□ -0.96
MACF1Q9UPN3 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
MACF1Q9UPN3 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
MACF1Q9UPN3 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC9.08□□□□□ -0.96
MACF1Q9UPN3 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC9.08□□□□□ -0.96
MACF1Q9UPN3 RN7SL471P-201ENST00000580476 299 ntBASIC9.08□□□□□ -0.96
MACF1Q9UPN3 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
MACF1Q9UPN3 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC9.08□□□□□ -0.96
MACF1Q9UPN3 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
MACF1Q9UPN3 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
MACF1Q9UPN3 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC9.08□□□□□ -0.96
MACF1Q9UPN3 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
MACF1Q9UPN3 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
MACF1Q9UPN3 MMP23A-201ENST00000234610 1017 ntBASIC9.08□□□□□ -0.96
MACF1Q9UPN3 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC9.08□□□□□ -0.96
MACF1Q9UPN3 AC104187.1-201ENST00000607510 612 ntBASIC9.08□□□□□ -0.96
MACF1Q9UPN3 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
MACF1Q9UPN3 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC9.07□□□□□ -0.96
MACF1Q9UPN3 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
MACF1Q9UPN3 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC9.07□□□□□ -0.96
MACF1Q9UPN3 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
MACF1Q9UPN3 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
MACF1Q9UPN3 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
MACF1Q9UPN3 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC9.07□□□□□ -0.96
MACF1Q9UPN3 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
MACF1Q9UPN3 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
MACF1Q9UPN3 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
MACF1Q9UPN3 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC9.07□□□□□ -0.96
MACF1Q9UPN3 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
MACF1Q9UPN3 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
MACF1Q9UPN3 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
MACF1Q9UPN3 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC9.07□□□□□ -0.96
MACF1Q9UPN3 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
MACF1Q9UPN3 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
MACF1Q9UPN3 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC9.07□□□□□ -0.96
MACF1Q9UPN3 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC9.07□□□□□ -0.96
MACF1Q9UPN3 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms