Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
COPS3Q9UNS2 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
COPS3Q9UNS2 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.21■□□□□ 0.67
COPS3Q9UNS2 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
COPS3Q9UNS2 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC19.21■□□□□ 0.67
COPS3Q9UNS2 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.21■□□□□ 0.67
COPS3Q9UNS2 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.21■□□□□ 0.67
COPS3Q9UNS2 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
COPS3Q9UNS2 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COPS3Q9UNS2 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COPS3Q9UNS2 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
COPS3Q9UNS2 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COPS3Q9UNS2 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
COPS3Q9UNS2 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COPS3Q9UNS2 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
COPS3Q9UNS2 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COPS3Q9UNS2 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.2■□□□□ 0.66
COPS3Q9UNS2 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC19.2■□□□□ 0.66
COPS3Q9UNS2 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
COPS3Q9UNS2 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
COPS3Q9UNS2 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COPS3Q9UNS2 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.2■□□□□ 0.66
COPS3Q9UNS2 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.2■□□□□ 0.66
COPS3Q9UNS2 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
COPS3Q9UNS2 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COPS3Q9UNS2 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
COPS3Q9UNS2 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COPS3Q9UNS2 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.19■□□□□ 0.66
COPS3Q9UNS2 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COPS3Q9UNS2 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC19.19■□□□□ 0.66
COPS3Q9UNS2 AC009299.2-201ENST00000482477 511 ntBASIC19.19■□□□□ 0.66
COPS3Q9UNS2 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
COPS3Q9UNS2 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COPS3Q9UNS2 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COPS3Q9UNS2 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
COPS3Q9UNS2 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COPS3Q9UNS2 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
COPS3Q9UNS2 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.19■□□□□ 0.66
COPS3Q9UNS2 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.18■□□□□ 0.66
COPS3Q9UNS2 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
COPS3Q9UNS2 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.18■□□□□ 0.66
COPS3Q9UNS2 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
COPS3Q9UNS2 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COPS3Q9UNS2 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
COPS3Q9UNS2 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COPS3Q9UNS2 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
COPS3Q9UNS2 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
COPS3Q9UNS2 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
COPS3Q9UNS2 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.18■□□□□ 0.66
COPS3Q9UNS2 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.18■□□□□ 0.66
COPS3Q9UNS2 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.18■□□□□ 0.66
COPS3Q9UNS2 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COPS3Q9UNS2 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
COPS3Q9UNS2 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
COPS3Q9UNS2 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
COPS3Q9UNS2 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
COPS3Q9UNS2 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.17■□□□□ 0.66
COPS3Q9UNS2 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
COPS3Q9UNS2 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC19.17■□□□□ 0.66
COPS3Q9UNS2 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COPS3Q9UNS2 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COPS3Q9UNS2 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
COPS3Q9UNS2 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COPS3Q9UNS2 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COPS3Q9UNS2 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
COPS3Q9UNS2 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
COPS3Q9UNS2 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.16■□□□□ 0.66
COPS3Q9UNS2 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
COPS3Q9UNS2 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COPS3Q9UNS2 UNC93B8-201ENST00000511903 705 ntBASIC19.16■□□□□ 0.66
COPS3Q9UNS2 AL451085.2-201ENST00000605085 799 ntBASIC19.16■□□□□ 0.66
COPS3Q9UNS2 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COPS3Q9UNS2 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
COPS3Q9UNS2 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
COPS3Q9UNS2 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.16■□□□□ 0.66
COPS3Q9UNS2 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
COPS3Q9UNS2 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
COPS3Q9UNS2 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
COPS3Q9UNS2 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.16■□□□□ 0.66
COPS3Q9UNS2 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
COPS3Q9UNS2 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
COPS3Q9UNS2 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
COPS3Q9UNS2 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
COPS3Q9UNS2 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
COPS3Q9UNS2 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
COPS3Q9UNS2 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
COPS3Q9UNS2 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
COPS3Q9UNS2 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC19.15■□□□□ 0.66
COPS3Q9UNS2 AL117332.1-201ENST00000622628 974 ntBASIC19.15■□□□□ 0.66
COPS3Q9UNS2 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
COPS3Q9UNS2 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.15■□□□□ 0.66
COPS3Q9UNS2 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
COPS3Q9UNS2 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
COPS3Q9UNS2 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
COPS3Q9UNS2 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
COPS3Q9UNS2 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
COPS3Q9UNS2 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.15■□□□□ 0.66
COPS3Q9UNS2 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
COPS3Q9UNS2 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
COPS3Q9UNS2 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms