Protein–RNA interactions for Protein: Q9NYK5

MRPL39, 39S ribosomal protein L39, mitochondrial, humanhuman

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL39Q9NYK5 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
MRPL39Q9NYK5 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
MRPL39Q9NYK5 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
MRPL39Q9NYK5 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
MRPL39Q9NYK5 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
MRPL39Q9NYK5 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
MRPL39Q9NYK5 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
MRPL39Q9NYK5 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
MRPL39Q9NYK5 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
MRPL39Q9NYK5 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.72■□□□□ 0.75
MRPL39Q9NYK5 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
MRPL39Q9NYK5 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
MRPL39Q9NYK5 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
MRPL39Q9NYK5 AC131281.2-201ENST00000520478 145 ntBASIC19.72■□□□□ 0.75
MRPL39Q9NYK5 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC19.72■□□□□ 0.75
MRPL39Q9NYK5 MIR3181-201ENST00000578512 73 ntBASIC19.72■□□□□ 0.75
MRPL39Q9NYK5 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
MRPL39Q9NYK5 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
MRPL39Q9NYK5 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
MRPL39Q9NYK5 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC19.72■□□□□ 0.75
MRPL39Q9NYK5 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
MRPL39Q9NYK5 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
MRPL39Q9NYK5 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
MRPL39Q9NYK5 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
MRPL39Q9NYK5 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
MRPL39Q9NYK5 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.71■□□□□ 0.75
MRPL39Q9NYK5 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
MRPL39Q9NYK5 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC19.71■□□□□ 0.75
MRPL39Q9NYK5 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
MRPL39Q9NYK5 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
MRPL39Q9NYK5 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
MRPL39Q9NYK5 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
MRPL39Q9NYK5 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
MRPL39Q9NYK5 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.71■□□□□ 0.75
MRPL39Q9NYK5 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.7■□□□□ 0.74
MRPL39Q9NYK5 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
MRPL39Q9NYK5 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
MRPL39Q9NYK5 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC19.7■□□□□ 0.74
MRPL39Q9NYK5 DUX4L19-201ENST00000557448 1267 ntBASIC19.7■□□□□ 0.74
MRPL39Q9NYK5 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC19.7■□□□□ 0.74
MRPL39Q9NYK5 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC19.7■□□□□ 0.74
MRPL39Q9NYK5 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
MRPL39Q9NYK5 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
MRPL39Q9NYK5 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.7■□□□□ 0.74
MRPL39Q9NYK5 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
MRPL39Q9NYK5 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
MRPL39Q9NYK5 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
MRPL39Q9NYK5 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.69■□□□□ 0.74
MRPL39Q9NYK5 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
MRPL39Q9NYK5 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
MRPL39Q9NYK5 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
MRPL39Q9NYK5 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
MRPL39Q9NYK5 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
MRPL39Q9NYK5 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
MRPL39Q9NYK5 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
MRPL39Q9NYK5 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
MRPL39Q9NYK5 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
MRPL39Q9NYK5 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
MRPL39Q9NYK5 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
MRPL39Q9NYK5 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
MRPL39Q9NYK5 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
MRPL39Q9NYK5 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
MRPL39Q9NYK5 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
MRPL39Q9NYK5 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.68■□□□□ 0.74
MRPL39Q9NYK5 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
MRPL39Q9NYK5 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
MRPL39Q9NYK5 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
MRPL39Q9NYK5 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
MRPL39Q9NYK5 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
MRPL39Q9NYK5 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
MRPL39Q9NYK5 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
MRPL39Q9NYK5 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
MRPL39Q9NYK5 CA15P2-201ENST00000611168 834 ntBASIC19.68■□□□□ 0.74
MRPL39Q9NYK5 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
MRPL39Q9NYK5 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
MRPL39Q9NYK5 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
MRPL39Q9NYK5 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
MRPL39Q9NYK5 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.68■□□□□ 0.74
MRPL39Q9NYK5 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
MRPL39Q9NYK5 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
MRPL39Q9NYK5 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MRPL39Q9NYK5 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MRPL39Q9NYK5 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
MRPL39Q9NYK5 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.67■□□□□ 0.74
MRPL39Q9NYK5 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.67■□□□□ 0.74
MRPL39Q9NYK5 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MRPL39Q9NYK5 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MRPL39Q9NYK5 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
MRPL39Q9NYK5 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MRPL39Q9NYK5 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC19.67■□□□□ 0.74
MRPL39Q9NYK5 AL138724.1-201ENST00000606771 1088 ntBASIC19.67■□□□□ 0.74
MRPL39Q9NYK5 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
MRPL39Q9NYK5 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
MRPL39Q9NYK5 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
MRPL39Q9NYK5 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.67■□□□□ 0.74
MRPL39Q9NYK5 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
MRPL39Q9NYK5 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MRPL39Q9NYK5 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MRPL39Q9NYK5 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MRPL39Q9NYK5 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms