Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC19.66■□□□□ 0.74
CLN6Q9NWW5 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
CLN6Q9NWW5 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
CLN6Q9NWW5 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.66■□□□□ 0.74
CLN6Q9NWW5 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLN6Q9NWW5 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLN6Q9NWW5 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CLN6Q9NWW5 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.66■□□□□ 0.74
CLN6Q9NWW5 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLN6Q9NWW5 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLN6Q9NWW5 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CLN6Q9NWW5 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CLN6Q9NWW5 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CLN6Q9NWW5 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
CLN6Q9NWW5 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
CLN6Q9NWW5 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.65■□□□□ 0.74
CLN6Q9NWW5 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLN6Q9NWW5 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CLN6Q9NWW5 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC19.65■□□□□ 0.74
CLN6Q9NWW5 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.65■□□□□ 0.74
CLN6Q9NWW5 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.65■□□□□ 0.74
CLN6Q9NWW5 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CLN6Q9NWW5 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CLN6Q9NWW5 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CLN6Q9NWW5 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CLN6Q9NWW5 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CLN6Q9NWW5 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
CLN6Q9NWW5 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CLN6Q9NWW5 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
CLN6Q9NWW5 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLN6Q9NWW5 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19.64■□□□□ 0.73
CLN6Q9NWW5 TK2-202ENST00000417693 1046 ntTSL 2 BASIC19.64■□□□□ 0.73
CLN6Q9NWW5 DUX4L4-201ENST00000566884 1269 ntBASIC19.64■□□□□ 0.73
CLN6Q9NWW5 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CLN6Q9NWW5 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLN6Q9NWW5 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.64■□□□□ 0.73
CLN6Q9NWW5 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLN6Q9NWW5 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.64■□□□□ 0.73
CLN6Q9NWW5 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLN6Q9NWW5 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLN6Q9NWW5 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLN6Q9NWW5 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLN6Q9NWW5 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLN6Q9NWW5 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CLN6Q9NWW5 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CLN6Q9NWW5 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLN6Q9NWW5 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.63■□□□□ 0.73
CLN6Q9NWW5 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLN6Q9NWW5 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC19.63■□□□□ 0.73
CLN6Q9NWW5 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLN6Q9NWW5 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLN6Q9NWW5 GUK1-208ENST00000366728 842 ntTSL 2 BASIC19.63■□□□□ 0.73
CLN6Q9NWW5 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC19.63■□□□□ 0.73
CLN6Q9NWW5 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC19.63■□□□□ 0.73
CLN6Q9NWW5 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC19.63■□□□□ 0.73
CLN6Q9NWW5 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
CLN6Q9NWW5 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.63■□□□□ 0.73
CLN6Q9NWW5 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.63■□□□□ 0.73
CLN6Q9NWW5 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CLN6Q9NWW5 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.63■□□□□ 0.73
CLN6Q9NWW5 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLN6Q9NWW5 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CLN6Q9NWW5 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.62■□□□□ 0.73
CLN6Q9NWW5 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLN6Q9NWW5 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.62■□□□□ 0.73
CLN6Q9NWW5 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CLN6Q9NWW5 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC19.62■□□□□ 0.73
CLN6Q9NWW5 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLN6Q9NWW5 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CLN6Q9NWW5 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLN6Q9NWW5 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC19.62■□□□□ 0.73
CLN6Q9NWW5 FEM1AP4-201ENST00000443167 1987 ntBASIC19.62■□□□□ 0.73
CLN6Q9NWW5 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.62■□□□□ 0.73
CLN6Q9NWW5 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CLN6Q9NWW5 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLN6Q9NWW5 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLN6Q9NWW5 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLN6Q9NWW5 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLN6Q9NWW5 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLN6Q9NWW5 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CLN6Q9NWW5 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CLN6Q9NWW5 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.61■□□□□ 0.73
CLN6Q9NWW5 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CLN6Q9NWW5 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
CLN6Q9NWW5 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CLN6Q9NWW5 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
CLN6Q9NWW5 AC004687.1-201ENST00000579003 1625 ntBASIC19.61■□□□□ 0.73
CLN6Q9NWW5 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
CLN6Q9NWW5 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
CLN6Q9NWW5 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLN6Q9NWW5 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CLN6Q9NWW5 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLN6Q9NWW5 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CLN6Q9NWW5 AC005703.6-201ENST00000623265 1329 ntBASIC19.6■□□□□ 0.73
CLN6Q9NWW5 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLN6Q9NWW5 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLN6Q9NWW5 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CLN6Q9NWW5 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CLN6Q9NWW5 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
CLN6Q9NWW5 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms