Protein–RNA interactions for Protein: Q9NWF9

RNF216, E3 ubiquitin-protein ligase RNF216, humanhuman

Predicted RBP Predictions only

Length 866 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216Q9NWF9 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
RNF216Q9NWF9 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC24.34■■□□□ 1.49
RNF216Q9NWF9 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC24.34■■□□□ 1.49
RNF216Q9NWF9 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC24.34■■□□□ 1.49
RNF216Q9NWF9 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC24.34■■□□□ 1.49
RNF216Q9NWF9 AC006213.5-201ENST00000619673 288 ntBASIC24.34■■□□□ 1.49
RNF216Q9NWF9 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC24.34■■□□□ 1.49
RNF216Q9NWF9 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
RNF216Q9NWF9 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
RNF216Q9NWF9 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
RNF216Q9NWF9 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
RNF216Q9NWF9 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC24.34■■□□□ 1.49
RNF216Q9NWF9 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC24.34■■□□□ 1.49
RNF216Q9NWF9 AC233723.2-201ENST00000623798 2106 ntBASIC24.34■■□□□ 1.49
RNF216Q9NWF9 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
RNF216Q9NWF9 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
RNF216Q9NWF9 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC24.33■■□□□ 1.49
RNF216Q9NWF9 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
RNF216Q9NWF9 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC24.33■■□□□ 1.49
RNF216Q9NWF9 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
RNF216Q9NWF9 AC027612.3-201ENST00000413684 1047 ntBASIC24.33■■□□□ 1.49
RNF216Q9NWF9 YY1P1-201ENST00000427625 668 ntBASIC24.33■■□□□ 1.49
RNF216Q9NWF9 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC24.33■■□□□ 1.49
RNF216Q9NWF9 MAPK10-223ENST00000511167 1265 ntTSL 5 BASIC24.33■■□□□ 1.49
RNF216Q9NWF9 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC24.33■■□□□ 1.49
RNF216Q9NWF9 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
RNF216Q9NWF9 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC24.33■■□□□ 1.49
RNF216Q9NWF9 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
RNF216Q9NWF9 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC24.33■■□□□ 1.49
RNF216Q9NWF9 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
RNF216Q9NWF9 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC24.32■■□□□ 1.48
RNF216Q9NWF9 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC24.32■■□□□ 1.48
RNF216Q9NWF9 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
RNF216Q9NWF9 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC24.32■■□□□ 1.48
RNF216Q9NWF9 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
RNF216Q9NWF9 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC24.32■■□□□ 1.48
RNF216Q9NWF9 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
RNF216Q9NWF9 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC24.32■■□□□ 1.48
RNF216Q9NWF9 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC24.32■■□□□ 1.48
RNF216Q9NWF9 DUX4L4-201ENST00000566884 1269 ntBASIC24.32■■□□□ 1.48
RNF216Q9NWF9 AC020910.4-201ENST00000612269 540 ntBASIC24.32■■□□□ 1.48
RNF216Q9NWF9 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
RNF216Q9NWF9 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC24.32■■□□□ 1.48
RNF216Q9NWF9 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
RNF216Q9NWF9 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
RNF216Q9NWF9 LINC00565-201ENST00000562710 2331 ntBASIC24.32■■□□□ 1.48
RNF216Q9NWF9 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC24.32■■□□□ 1.48
RNF216Q9NWF9 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
RNF216Q9NWF9 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
RNF216Q9NWF9 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
RNF216Q9NWF9 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC24.31■■□□□ 1.48
RNF216Q9NWF9 ASB1-202ENST00000409297 878 ntTSL 5 BASIC24.31■■□□□ 1.48
RNF216Q9NWF9 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC24.31■■□□□ 1.48
RNF216Q9NWF9 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC24.31■■□□□ 1.48
RNF216Q9NWF9 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC24.31■■□□□ 1.48
RNF216Q9NWF9 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC24.31■■□□□ 1.48
RNF216Q9NWF9 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC24.31■■□□□ 1.48
RNF216Q9NWF9 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC24.31■■□□□ 1.48
RNF216Q9NWF9 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC24.31■■□□□ 1.48
RNF216Q9NWF9 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
RNF216Q9NWF9 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
RNF216Q9NWF9 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
RNF216Q9NWF9 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC24.31■■□□□ 1.48
RNF216Q9NWF9 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC24.31■■□□□ 1.48
RNF216Q9NWF9 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
RNF216Q9NWF9 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
RNF216Q9NWF9 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
RNF216Q9NWF9 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
RNF216Q9NWF9 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
RNF216Q9NWF9 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
RNF216Q9NWF9 PSMC1P2-201ENST00000423961 1204 ntBASIC24.3■■□□□ 1.48
RNF216Q9NWF9 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
RNF216Q9NWF9 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC24.3■■□□□ 1.48
RNF216Q9NWF9 OR2I1P-207ENST00000453522 948 ntBASIC24.3■■□□□ 1.48
RNF216Q9NWF9 NPM1P28-201ENST00000492269 840 ntBASIC24.3■■□□□ 1.48
RNF216Q9NWF9 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC24.3■■□□□ 1.48
RNF216Q9NWF9 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
RNF216Q9NWF9 AC090950.1-202ENST00000605733 644 ntBASIC24.3■■□□□ 1.48
RNF216Q9NWF9 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
RNF216Q9NWF9 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC24.3■■□□□ 1.48
RNF216Q9NWF9 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
RNF216Q9NWF9 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
RNF216Q9NWF9 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
RNF216Q9NWF9 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
RNF216Q9NWF9 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC24.29■■□□□ 1.48
RNF216Q9NWF9 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC24.29■■□□□ 1.48
RNF216Q9NWF9 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
RNF216Q9NWF9 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC24.29■■□□□ 1.48
RNF216Q9NWF9 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC24.29■■□□□ 1.48
RNF216Q9NWF9 AC068631.1-255ENST00000608173 588 ntTSL 5 BASIC24.29■■□□□ 1.48
RNF216Q9NWF9 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
RNF216Q9NWF9 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC24.29■■□□□ 1.48
RNF216Q9NWF9 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
RNF216Q9NWF9 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
RNF216Q9NWF9 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC24.29■■□□□ 1.48
RNF216Q9NWF9 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
RNF216Q9NWF9 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
RNF216Q9NWF9 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
RNF216Q9NWF9 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
RNF216Q9NWF9 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms