Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
PRDM9Q9NQV7 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PRDM9Q9NQV7 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
PRDM9Q9NQV7 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
PRDM9Q9NQV7 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.42■□□□□ 0.86
PRDM9Q9NQV7 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PRDM9Q9NQV7 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.42■□□□□ 0.86
PRDM9Q9NQV7 AC012414.1-201ENST00000556676 535 ntBASIC20.42■□□□□ 0.86
PRDM9Q9NQV7 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.42■□□□□ 0.86
PRDM9Q9NQV7 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
PRDM9Q9NQV7 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PRDM9Q9NQV7 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PRDM9Q9NQV7 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.42■□□□□ 0.86
PRDM9Q9NQV7 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.41■□□□□ 0.86
PRDM9Q9NQV7 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
PRDM9Q9NQV7 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PRDM9Q9NQV7 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PRDM9Q9NQV7 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PRDM9Q9NQV7 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PRDM9Q9NQV7 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.41■□□□□ 0.86
PRDM9Q9NQV7 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
PRDM9Q9NQV7 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.41■□□□□ 0.86
PRDM9Q9NQV7 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.41■□□□□ 0.86
PRDM9Q9NQV7 OR7E47P-201ENST00000546390 1422 ntBASIC20.41■□□□□ 0.86
PRDM9Q9NQV7 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PRDM9Q9NQV7 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PRDM9Q9NQV7 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PRDM9Q9NQV7 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
PRDM9Q9NQV7 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
PRDM9Q9NQV7 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
PRDM9Q9NQV7 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
PRDM9Q9NQV7 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PRDM9Q9NQV7 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
PRDM9Q9NQV7 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PRDM9Q9NQV7 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PRDM9Q9NQV7 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.4■□□□□ 0.86
PRDM9Q9NQV7 AL034346.1-201ENST00000568244 1277 ntBASIC20.4■□□□□ 0.86
PRDM9Q9NQV7 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
PRDM9Q9NQV7 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.39■□□□□ 0.86
PRDM9Q9NQV7 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PRDM9Q9NQV7 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.39■□□□□ 0.86
PRDM9Q9NQV7 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PRDM9Q9NQV7 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC20.39■□□□□ 0.86
PRDM9Q9NQV7 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
PRDM9Q9NQV7 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.39■□□□□ 0.85
PRDM9Q9NQV7 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.39■□□□□ 0.85
PRDM9Q9NQV7 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20.39■□□□□ 0.85
PRDM9Q9NQV7 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PRDM9Q9NQV7 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.39■□□□□ 0.85
PRDM9Q9NQV7 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.39■□□□□ 0.85
PRDM9Q9NQV7 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.39■□□□□ 0.85
PRDM9Q9NQV7 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PRDM9Q9NQV7 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PRDM9Q9NQV7 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PRDM9Q9NQV7 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
PRDM9Q9NQV7 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
PRDM9Q9NQV7 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PRDM9Q9NQV7 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PRDM9Q9NQV7 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.38■□□□□ 0.85
PRDM9Q9NQV7 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
PRDM9Q9NQV7 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
PRDM9Q9NQV7 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PRDM9Q9NQV7 MIR935-201ENST00000401179 91 ntBASIC20.38■□□□□ 0.85
PRDM9Q9NQV7 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.38■□□□□ 0.85
PRDM9Q9NQV7 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.38■□□□□ 0.85
PRDM9Q9NQV7 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PRDM9Q9NQV7 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
PRDM9Q9NQV7 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
PRDM9Q9NQV7 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.38■□□□□ 0.85
PRDM9Q9NQV7 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
PRDM9Q9NQV7 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PRDM9Q9NQV7 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PRDM9Q9NQV7 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
PRDM9Q9NQV7 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PRDM9Q9NQV7 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.37■□□□□ 0.85
PRDM9Q9NQV7 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PRDM9Q9NQV7 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PRDM9Q9NQV7 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
PRDM9Q9NQV7 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PRDM9Q9NQV7 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.37■□□□□ 0.85
PRDM9Q9NQV7 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PRDM9Q9NQV7 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.37■□□□□ 0.85
PRDM9Q9NQV7 SMUG1P1-201ENST00000590640 811 ntBASIC20.37■□□□□ 0.85
PRDM9Q9NQV7 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.37■□□□□ 0.85
PRDM9Q9NQV7 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
PRDM9Q9NQV7 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
PRDM9Q9NQV7 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.37■□□□□ 0.85
PRDM9Q9NQV7 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
PRDM9Q9NQV7 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.37■□□□□ 0.85
PRDM9Q9NQV7 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PRDM9Q9NQV7 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.36■□□□□ 0.85
PRDM9Q9NQV7 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PRDM9Q9NQV7 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PRDM9Q9NQV7 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PRDM9Q9NQV7 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.36■□□□□ 0.85
PRDM9Q9NQV7 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PRDM9Q9NQV7 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
PRDM9Q9NQV7 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PRDM9Q9NQV7 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PRDM9Q9NQV7 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms