Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
C12orf4Q9NQ89 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
C12orf4Q9NQ89 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
C12orf4Q9NQ89 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
C12orf4Q9NQ89 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
C12orf4Q9NQ89 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
C12orf4Q9NQ89 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
C12orf4Q9NQ89 AC092053.2-201ENST00000640557 1818 ntBASIC18.63■□□□□ 0.57
C12orf4Q9NQ89 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
C12orf4Q9NQ89 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.62■□□□□ 0.57
C12orf4Q9NQ89 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
C12orf4Q9NQ89 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
C12orf4Q9NQ89 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC18.62■□□□□ 0.57
C12orf4Q9NQ89 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
C12orf4Q9NQ89 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
C12orf4Q9NQ89 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
C12orf4Q9NQ89 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
C12orf4Q9NQ89 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
C12orf4Q9NQ89 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
C12orf4Q9NQ89 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
C12orf4Q9NQ89 TK2-202ENST00000417693 1046 ntTSL 2 BASIC18.62■□□□□ 0.57
C12orf4Q9NQ89 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
C12orf4Q9NQ89 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC18.62■□□□□ 0.57
C12orf4Q9NQ89 AC012354.3-201ENST00000623734 483 ntBASIC18.62■□□□□ 0.57
C12orf4Q9NQ89 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
C12orf4Q9NQ89 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC18.62■□□□□ 0.57
C12orf4Q9NQ89 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
C12orf4Q9NQ89 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC18.62■□□□□ 0.57
C12orf4Q9NQ89 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
C12orf4Q9NQ89 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
C12orf4Q9NQ89 AC139530.1-201ENST00000575312 1977 ntBASIC18.62■□□□□ 0.57
C12orf4Q9NQ89 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
C12orf4Q9NQ89 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
C12orf4Q9NQ89 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
C12orf4Q9NQ89 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
C12orf4Q9NQ89 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
C12orf4Q9NQ89 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC18.61■□□□□ 0.57
C12orf4Q9NQ89 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC18.61■□□□□ 0.57
C12orf4Q9NQ89 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
C12orf4Q9NQ89 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC18.61■□□□□ 0.57
C12orf4Q9NQ89 YBX1P4-201ENST00000392794 808 ntBASIC18.61■□□□□ 0.57
C12orf4Q9NQ89 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.61■□□□□ 0.57
C12orf4Q9NQ89 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
C12orf4Q9NQ89 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.61■□□□□ 0.57
C12orf4Q9NQ89 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC18.61■□□□□ 0.57
C12orf4Q9NQ89 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.61■□□□□ 0.57
C12orf4Q9NQ89 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
C12orf4Q9NQ89 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
C12orf4Q9NQ89 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
C12orf4Q9NQ89 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
C12orf4Q9NQ89 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
C12orf4Q9NQ89 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
C12orf4Q9NQ89 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
C12orf4Q9NQ89 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.6■□□□□ 0.57
C12orf4Q9NQ89 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
C12orf4Q9NQ89 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
C12orf4Q9NQ89 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC18.6■□□□□ 0.57
C12orf4Q9NQ89 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
C12orf4Q9NQ89 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
C12orf4Q9NQ89 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
C12orf4Q9NQ89 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
C12orf4Q9NQ89 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
C12orf4Q9NQ89 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC18.59■□□□□ 0.57
C12orf4Q9NQ89 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
C12orf4Q9NQ89 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC18.59■□□□□ 0.57
C12orf4Q9NQ89 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
C12orf4Q9NQ89 C11orf96-202ENST00000528572 1834 ntBASIC18.59■□□□□ 0.57
C12orf4Q9NQ89 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
C12orf4Q9NQ89 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC18.59■□□□□ 0.57
C12orf4Q9NQ89 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC18.59■□□□□ 0.57
C12orf4Q9NQ89 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC18.59■□□□□ 0.57
C12orf4Q9NQ89 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.59■□□□□ 0.57
C12orf4Q9NQ89 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
C12orf4Q9NQ89 LINC01529-204ENST00000636474 1715 ntBASIC18.59■□□□□ 0.57
C12orf4Q9NQ89 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC18.59■□□□□ 0.57
C12orf4Q9NQ89 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
C12orf4Q9NQ89 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
C12orf4Q9NQ89 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
C12orf4Q9NQ89 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
C12orf4Q9NQ89 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
C12orf4Q9NQ89 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
C12orf4Q9NQ89 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.59■□□□□ 0.57
C12orf4Q9NQ89 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
C12orf4Q9NQ89 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
C12orf4Q9NQ89 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
C12orf4Q9NQ89 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
C12orf4Q9NQ89 AC005703.6-201ENST00000623265 1329 ntBASIC18.58■□□□□ 0.57
C12orf4Q9NQ89 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
C12orf4Q9NQ89 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
C12orf4Q9NQ89 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
C12orf4Q9NQ89 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC18.58■□□□□ 0.56
C12orf4Q9NQ89 AC103834.1-201ENST00000520383 144 ntBASIC18.58■□□□□ 0.56
C12orf4Q9NQ89 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
C12orf4Q9NQ89 AC103724.3-201ENST00000564481 992 ntBASIC18.58■□□□□ 0.56
C12orf4Q9NQ89 AC137630.3-201ENST00000607245 391 ntBASIC18.58■□□□□ 0.56
C12orf4Q9NQ89 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
C12orf4Q9NQ89 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
C12orf4Q9NQ89 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
C12orf4Q9NQ89 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
C12orf4Q9NQ89 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms