Protein–RNA interactions for Protein: Q9HCN8

SDF2L1, Stromal cell-derived factor 2-like protein 1, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1Q9HCN8 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SDF2L1Q9HCN8 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.28
SDF2L1Q9HCN8 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
SDF2L1Q9HCN8 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
SDF2L1Q9HCN8 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
SDF2L1Q9HCN8 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC16.83■□□□□ 0.28
SDF2L1Q9HCN8 HYI-213ENST00000583037 1322 ntTSL 5 BASIC16.83■□□□□ 0.28
SDF2L1Q9HCN8 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SDF2L1Q9HCN8 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SDF2L1Q9HCN8 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC16.83■□□□□ 0.28
SDF2L1Q9HCN8 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SDF2L1Q9HCN8 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC16.83■□□□□ 0.28
SDF2L1Q9HCN8 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
SDF2L1Q9HCN8 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
SDF2L1Q9HCN8 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SDF2L1Q9HCN8 FEM1AP1-201ENST00000431297 1995 ntBASIC16.82■□□□□ 0.28
SDF2L1Q9HCN8 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC16.82■□□□□ 0.28
SDF2L1Q9HCN8 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SDF2L1Q9HCN8 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SDF2L1Q9HCN8 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SDF2L1Q9HCN8 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SDF2L1Q9HCN8 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC16.82■□□□□ 0.28
SDF2L1Q9HCN8 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SDF2L1Q9HCN8 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
SDF2L1Q9HCN8 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SDF2L1Q9HCN8 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SDF2L1Q9HCN8 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC16.82■□□□□ 0.28
SDF2L1Q9HCN8 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
SDF2L1Q9HCN8 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SDF2L1Q9HCN8 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SDF2L1Q9HCN8 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC16.81■□□□□ 0.28
SDF2L1Q9HCN8 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SDF2L1Q9HCN8 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC16.81■□□□□ 0.28
SDF2L1Q9HCN8 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
SDF2L1Q9HCN8 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC16.81■□□□□ 0.28
SDF2L1Q9HCN8 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SDF2L1Q9HCN8 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC16.81■□□□□ 0.28
SDF2L1Q9HCN8 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
SDF2L1Q9HCN8 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SDF2L1Q9HCN8 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC16.81■□□□□ 0.28
SDF2L1Q9HCN8 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC16.81■□□□□ 0.28
SDF2L1Q9HCN8 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC16.81■□□□□ 0.28
SDF2L1Q9HCN8 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SDF2L1Q9HCN8 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC16.8■□□□□ 0.28
SDF2L1Q9HCN8 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SDF2L1Q9HCN8 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
SDF2L1Q9HCN8 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC16.8■□□□□ 0.28
SDF2L1Q9HCN8 SPCS2P3-201ENST00000500401 656 ntBASIC16.8■□□□□ 0.28
SDF2L1Q9HCN8 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
SDF2L1Q9HCN8 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SDF2L1Q9HCN8 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SDF2L1Q9HCN8 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC16.79■□□□□ 0.28
SDF2L1Q9HCN8 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
SDF2L1Q9HCN8 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SDF2L1Q9HCN8 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC16.79■□□□□ 0.28
SDF2L1Q9HCN8 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SDF2L1Q9HCN8 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SDF2L1Q9HCN8 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
SDF2L1Q9HCN8 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SDF2L1Q9HCN8 DUX4L9-201ENST00000449051 1259 ntBASIC16.79■□□□□ 0.28
SDF2L1Q9HCN8 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC16.79■□□□□ 0.28
SDF2L1Q9HCN8 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
SDF2L1Q9HCN8 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SDF2L1Q9HCN8 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SDF2L1Q9HCN8 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SDF2L1Q9HCN8 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SDF2L1Q9HCN8 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SDF2L1Q9HCN8 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
SDF2L1Q9HCN8 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SDF2L1Q9HCN8 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
SDF2L1Q9HCN8 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SDF2L1Q9HCN8 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SDF2L1Q9HCN8 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
SDF2L1Q9HCN8 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC16.79■□□□□ 0.28
SDF2L1Q9HCN8 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SDF2L1Q9HCN8 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC16.78■□□□□ 0.28
SDF2L1Q9HCN8 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
SDF2L1Q9HCN8 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SDF2L1Q9HCN8 HYI-210ENST00000486909 905 ntTSL 5 BASIC16.78■□□□□ 0.28
SDF2L1Q9HCN8 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC16.78■□□□□ 0.28
SDF2L1Q9HCN8 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SDF2L1Q9HCN8 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SDF2L1Q9HCN8 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
SDF2L1Q9HCN8 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SDF2L1Q9HCN8 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC16.78■□□□□ 0.28
SDF2L1Q9HCN8 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SDF2L1Q9HCN8 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC16.77■□□□□ 0.28
SDF2L1Q9HCN8 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
SDF2L1Q9HCN8 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC16.77■□□□□ 0.28
SDF2L1Q9HCN8 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SDF2L1Q9HCN8 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC16.77■□□□□ 0.28
SDF2L1Q9HCN8 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC16.77■□□□□ 0.28
SDF2L1Q9HCN8 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
SDF2L1Q9HCN8 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC16.77■□□□□ 0.28
SDF2L1Q9HCN8 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
SDF2L1Q9HCN8 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SDF2L1Q9HCN8 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SDF2L1Q9HCN8 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
SDF2L1Q9HCN8 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC16.77■□□□□ 0.27
SDF2L1Q9HCN8 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms