Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
BRF2Q9HAW0 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.7■□□□□ 0.9
BRF2Q9HAW0 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.7■□□□□ 0.9
BRF2Q9HAW0 AC131212.1-201ENST00000613771 668 ntBASIC20.7■□□□□ 0.9
BRF2Q9HAW0 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
BRF2Q9HAW0 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
BRF2Q9HAW0 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
BRF2Q9HAW0 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
BRF2Q9HAW0 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.7■□□□□ 0.9
BRF2Q9HAW0 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.69■□□□□ 0.9
BRF2Q9HAW0 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
BRF2Q9HAW0 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
BRF2Q9HAW0 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
BRF2Q9HAW0 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
BRF2Q9HAW0 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
BRF2Q9HAW0 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.69■□□□□ 0.9
BRF2Q9HAW0 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.69■□□□□ 0.9
BRF2Q9HAW0 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
BRF2Q9HAW0 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.69■□□□□ 0.9
BRF2Q9HAW0 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
BRF2Q9HAW0 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
BRF2Q9HAW0 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
BRF2Q9HAW0 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
BRF2Q9HAW0 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
BRF2Q9HAW0 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.68■□□□□ 0.9
BRF2Q9HAW0 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
BRF2Q9HAW0 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
BRF2Q9HAW0 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
BRF2Q9HAW0 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
BRF2Q9HAW0 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.68■□□□□ 0.9
BRF2Q9HAW0 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
BRF2Q9HAW0 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
BRF2Q9HAW0 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
BRF2Q9HAW0 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
BRF2Q9HAW0 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
BRF2Q9HAW0 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.68■□□□□ 0.9
BRF2Q9HAW0 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
BRF2Q9HAW0 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
BRF2Q9HAW0 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
BRF2Q9HAW0 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
BRF2Q9HAW0 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
BRF2Q9HAW0 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
BRF2Q9HAW0 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
BRF2Q9HAW0 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.66■□□□□ 0.9
BRF2Q9HAW0 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
BRF2Q9HAW0 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
BRF2Q9HAW0 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
BRF2Q9HAW0 UNC93B3-201ENST00000308076 687 ntBASIC20.66■□□□□ 0.9
BRF2Q9HAW0 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
BRF2Q9HAW0 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
BRF2Q9HAW0 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.66■□□□□ 0.9
BRF2Q9HAW0 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
BRF2Q9HAW0 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.66■□□□□ 0.9
BRF2Q9HAW0 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
BRF2Q9HAW0 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
BRF2Q9HAW0 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
BRF2Q9HAW0 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
BRF2Q9HAW0 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
BRF2Q9HAW0 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
BRF2Q9HAW0 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.65■□□□□ 0.9
BRF2Q9HAW0 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
BRF2Q9HAW0 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
BRF2Q9HAW0 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
BRF2Q9HAW0 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
BRF2Q9HAW0 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
BRF2Q9HAW0 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
BRF2Q9HAW0 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
BRF2Q9HAW0 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
BRF2Q9HAW0 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
BRF2Q9HAW0 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
BRF2Q9HAW0 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
BRF2Q9HAW0 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
BRF2Q9HAW0 BX842568.3-201ENST00000418104 571 ntBASIC20.65■□□□□ 0.9
BRF2Q9HAW0 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
BRF2Q9HAW0 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.65■□□□□ 0.9
BRF2Q9HAW0 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
BRF2Q9HAW0 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
BRF2Q9HAW0 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.65■□□□□ 0.9
BRF2Q9HAW0 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.64■□□□□ 0.9
BRF2Q9HAW0 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.64■□□□□ 0.9
BRF2Q9HAW0 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.64■□□□□ 0.89
BRF2Q9HAW0 AL034346.1-201ENST00000568244 1277 ntBASIC20.64■□□□□ 0.89
BRF2Q9HAW0 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.64■□□□□ 0.89
BRF2Q9HAW0 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.64■□□□□ 0.89
BRF2Q9HAW0 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
BRF2Q9HAW0 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
BRF2Q9HAW0 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
BRF2Q9HAW0 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.64■□□□□ 0.89
BRF2Q9HAW0 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.63■□□□□ 0.89
BRF2Q9HAW0 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
BRF2Q9HAW0 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
BRF2Q9HAW0 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
BRF2Q9HAW0 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
BRF2Q9HAW0 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
BRF2Q9HAW0 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
BRF2Q9HAW0 MIR4767-201ENST00000582827 78 ntBASIC20.63■□□□□ 0.89
BRF2Q9HAW0 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.63■□□□□ 0.89
BRF2Q9HAW0 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
BRF2Q9HAW0 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
BRF2Q9HAW0 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms