Protein–RNA interactions for Protein: Q9H3R1

NDST4, Bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 4, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDST4Q9H3R1 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC23.57■■□□□ 1.36
NDST4Q9H3R1 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC23.57■■□□□ 1.36
NDST4Q9H3R1 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
NDST4Q9H3R1 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
NDST4Q9H3R1 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC23.57■■□□□ 1.36
NDST4Q9H3R1 MIR4466-201ENST00000606121 54 ntBASIC23.57■■□□□ 1.36
NDST4Q9H3R1 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC23.57■■□□□ 1.36
NDST4Q9H3R1 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC23.57■■□□□ 1.36
NDST4Q9H3R1 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
NDST4Q9H3R1 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
NDST4Q9H3R1 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
NDST4Q9H3R1 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC23.57■■□□□ 1.36
NDST4Q9H3R1 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
NDST4Q9H3R1 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
NDST4Q9H3R1 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
NDST4Q9H3R1 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
NDST4Q9H3R1 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC23.56■■□□□ 1.36
NDST4Q9H3R1 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
NDST4Q9H3R1 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
NDST4Q9H3R1 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
NDST4Q9H3R1 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
NDST4Q9H3R1 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
NDST4Q9H3R1 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
NDST4Q9H3R1 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC23.56■■□□□ 1.36
NDST4Q9H3R1 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC23.56■■□□□ 1.36
NDST4Q9H3R1 AC244015.2-201ENST00000616358 1861 ntBASIC23.56■■□□□ 1.36
NDST4Q9H3R1 USP48-205ENST00000421625 2818 ntTSL 2 BASIC23.55■■□□□ 1.36
NDST4Q9H3R1 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
NDST4Q9H3R1 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC23.55■■□□□ 1.36
NDST4Q9H3R1 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
NDST4Q9H3R1 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC23.55■■□□□ 1.36
NDST4Q9H3R1 HES6-206ENST00000409574 738 ntTSL 2 BASIC23.55■■□□□ 1.36
NDST4Q9H3R1 PTCHD3P2-201ENST00000424937 1205 ntBASIC23.55■■□□□ 1.36
NDST4Q9H3R1 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
NDST4Q9H3R1 AC010525.1-201ENST00000585559 441 ntBASIC23.55■■□□□ 1.36
NDST4Q9H3R1 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC23.55■■□□□ 1.36
NDST4Q9H3R1 OR7E47P-201ENST00000546390 1422 ntBASIC23.55■■□□□ 1.36
NDST4Q9H3R1 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
NDST4Q9H3R1 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
NDST4Q9H3R1 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC23.54■■□□□ 1.36
NDST4Q9H3R1 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
NDST4Q9H3R1 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC23.54■■□□□ 1.36
NDST4Q9H3R1 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
NDST4Q9H3R1 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
NDST4Q9H3R1 TRIR-202ENST00000588213 841 ntTSL 3 BASIC23.54■■□□□ 1.36
NDST4Q9H3R1 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
NDST4Q9H3R1 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC23.53■■□□□ 1.36
NDST4Q9H3R1 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC23.53■■□□□ 1.36
NDST4Q9H3R1 SERBP1P1-201ENST00000396021 1160 ntBASIC23.53■■□□□ 1.36
NDST4Q9H3R1 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC23.53■■□□□ 1.36
NDST4Q9H3R1 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
NDST4Q9H3R1 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC23.52■■□□□ 1.36
NDST4Q9H3R1 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
NDST4Q9H3R1 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
NDST4Q9H3R1 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
NDST4Q9H3R1 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC23.52■■□□□ 1.36
NDST4Q9H3R1 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
NDST4Q9H3R1 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
NDST4Q9H3R1 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC23.52■■□□□ 1.36
NDST4Q9H3R1 AL138724.1-201ENST00000606771 1088 ntBASIC23.52■■□□□ 1.36
NDST4Q9H3R1 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
NDST4Q9H3R1 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC23.52■■□□□ 1.36
NDST4Q9H3R1 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
NDST4Q9H3R1 SYT6-210ENST00000641643 1587 ntBASIC23.52■■□□□ 1.36
NDST4Q9H3R1 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.35
NDST4Q9H3R1 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
NDST4Q9H3R1 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
NDST4Q9H3R1 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
NDST4Q9H3R1 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
NDST4Q9H3R1 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
NDST4Q9H3R1 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
NDST4Q9H3R1 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
NDST4Q9H3R1 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
NDST4Q9H3R1 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC23.51■■□□□ 1.35
NDST4Q9H3R1 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
NDST4Q9H3R1 AC026471.6-201ENST00000622954 1905 ntBASIC23.51■■□□□ 1.35
NDST4Q9H3R1 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
NDST4Q9H3R1 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
NDST4Q9H3R1 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
NDST4Q9H3R1 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC23.5■■□□□ 1.35
NDST4Q9H3R1 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
NDST4Q9H3R1 AC010141.3-201ENST00000456659 717 ntBASIC23.5■■□□□ 1.35
NDST4Q9H3R1 DUX4L19-201ENST00000557448 1267 ntBASIC23.5■■□□□ 1.35
NDST4Q9H3R1 AC087239.1-201ENST00000622671 572 ntBASIC23.5■■□□□ 1.35
NDST4Q9H3R1 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
NDST4Q9H3R1 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC23.5■■□□□ 1.35
NDST4Q9H3R1 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC23.5■■□□□ 1.35
NDST4Q9H3R1 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC23.5■■□□□ 1.35
NDST4Q9H3R1 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
NDST4Q9H3R1 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
NDST4Q9H3R1 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
NDST4Q9H3R1 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
NDST4Q9H3R1 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
NDST4Q9H3R1 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC23.49■■□□□ 1.35
NDST4Q9H3R1 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
NDST4Q9H3R1 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
NDST4Q9H3R1 AC131281.2-201ENST00000520478 145 ntBASIC23.49■■□□□ 1.35
NDST4Q9H3R1 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC23.49■■□□□ 1.35
NDST4Q9H3R1 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC23.49■■□□□ 1.35
NDST4Q9H3R1 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC23.49■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms