Protein–RNA interactions for Protein: Q9H3M9

ATXN3L, Ataxin-3-like protein, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3LQ9H3M9 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC22.72■■□□□ 1.23
ATXN3LQ9H3M9 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC22.72■■□□□ 1.23
ATXN3LQ9H3M9 AC080038.1-201ENST00000611274 1154 ntBASIC22.72■■□□□ 1.23
ATXN3LQ9H3M9 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC22.72■■□□□ 1.23
ATXN3LQ9H3M9 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
ATXN3LQ9H3M9 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC22.71■■□□□ 1.23
ATXN3LQ9H3M9 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC22.71■■□□□ 1.23
ATXN3LQ9H3M9 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC22.71■■□□□ 1.23
ATXN3LQ9H3M9 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC22.71■■□□□ 1.23
ATXN3LQ9H3M9 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
ATXN3LQ9H3M9 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
ATXN3LQ9H3M9 AC079140.4-201ENST00000507448 529 ntBASIC22.71■■□□□ 1.23
ATXN3LQ9H3M9 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC22.71■■□□□ 1.23
ATXN3LQ9H3M9 TESC-206ENST00000541210 936 ntTSL 3 BASIC22.71■■□□□ 1.23
ATXN3LQ9H3M9 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC22.71■■□□□ 1.23
ATXN3LQ9H3M9 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
ATXN3LQ9H3M9 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
ATXN3LQ9H3M9 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
ATXN3LQ9H3M9 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
ATXN3LQ9H3M9 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
ATXN3LQ9H3M9 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC22.71■■□□□ 1.23
ATXN3LQ9H3M9 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC22.7■■□□□ 1.23
ATXN3LQ9H3M9 HSCB-202ENST00000398941 955 ntTSL 2 BASIC22.7■■□□□ 1.22
ATXN3LQ9H3M9 KRT19P1-201ENST00000405746 1186 ntBASIC22.7■■□□□ 1.22
ATXN3LQ9H3M9 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC22.7■■□□□ 1.22
ATXN3LQ9H3M9 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC22.7■■□□□ 1.22
ATXN3LQ9H3M9 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
ATXN3LQ9H3M9 CPT2-209ENST00000636935 803 ntTSL 5 BASIC22.7■■□□□ 1.22
ATXN3LQ9H3M9 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.22
ATXN3LQ9H3M9 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
ATXN3LQ9H3M9 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC22.7■■□□□ 1.22
ATXN3LQ9H3M9 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
ATXN3LQ9H3M9 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
ATXN3LQ9H3M9 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
ATXN3LQ9H3M9 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC22.69■■□□□ 1.22
ATXN3LQ9H3M9 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
ATXN3LQ9H3M9 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC22.69■■□□□ 1.22
ATXN3LQ9H3M9 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
ATXN3LQ9H3M9 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC22.69■■□□□ 1.22
ATXN3LQ9H3M9 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC22.69■■□□□ 1.22
ATXN3LQ9H3M9 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
ATXN3LQ9H3M9 ID1-201ENST00000376105 1233 ntBASIC22.69■■□□□ 1.22
ATXN3LQ9H3M9 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC22.69■■□□□ 1.22
ATXN3LQ9H3M9 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
ATXN3LQ9H3M9 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
ATXN3LQ9H3M9 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
ATXN3LQ9H3M9 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
ATXN3LQ9H3M9 AC133561.1-201ENST00000568600 2415 ntBASIC22.68■■□□□ 1.22
ATXN3LQ9H3M9 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
ATXN3LQ9H3M9 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
ATXN3LQ9H3M9 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
ATXN3LQ9H3M9 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
ATXN3LQ9H3M9 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC22.68■■□□□ 1.22
ATXN3LQ9H3M9 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC22.68■■□□□ 1.22
ATXN3LQ9H3M9 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
ATXN3LQ9H3M9 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC22.68■■□□□ 1.22
ATXN3LQ9H3M9 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
ATXN3LQ9H3M9 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
ATXN3LQ9H3M9 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
ATXN3LQ9H3M9 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
ATXN3LQ9H3M9 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
ATXN3LQ9H3M9 LTK-203ENST00000453182 2412 ntTSL 2 BASIC22.67■■□□□ 1.22
ATXN3LQ9H3M9 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
ATXN3LQ9H3M9 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC22.67■■□□□ 1.22
ATXN3LQ9H3M9 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC22.67■■□□□ 1.22
ATXN3LQ9H3M9 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC22.67■■□□□ 1.22
ATXN3LQ9H3M9 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
ATXN3LQ9H3M9 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC22.67■■□□□ 1.22
ATXN3LQ9H3M9 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
ATXN3LQ9H3M9 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC22.67■■□□□ 1.22
ATXN3LQ9H3M9 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC22.67■■□□□ 1.22
ATXN3LQ9H3M9 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
ATXN3LQ9H3M9 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
ATXN3LQ9H3M9 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
ATXN3LQ9H3M9 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
ATXN3LQ9H3M9 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
ATXN3LQ9H3M9 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC22.66■■□□□ 1.22
ATXN3LQ9H3M9 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC22.66■■□□□ 1.22
ATXN3LQ9H3M9 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
ATXN3LQ9H3M9 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
ATXN3LQ9H3M9 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
ATXN3LQ9H3M9 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
ATXN3LQ9H3M9 GAS2L1P2-201ENST00000436355 1356 ntBASIC22.65■■□□□ 1.22
ATXN3LQ9H3M9 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC22.65■■□□□ 1.22
ATXN3LQ9H3M9 AC005224.4-201ENST00000583262 1652 ntBASIC22.65■■□□□ 1.22
ATXN3LQ9H3M9 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC22.65■■□□□ 1.22
ATXN3LQ9H3M9 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
ATXN3LQ9H3M9 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
ATXN3LQ9H3M9 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC22.65■■□□□ 1.22
ATXN3LQ9H3M9 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC22.65■■□□□ 1.22
ATXN3LQ9H3M9 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
ATXN3LQ9H3M9 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
ATXN3LQ9H3M9 BID-214ENST00000617586 542 ntTSL 5 BASIC22.65■■□□□ 1.22
ATXN3LQ9H3M9 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
ATXN3LQ9H3M9 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC22.65■■□□□ 1.22
ATXN3LQ9H3M9 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC22.65■■□□□ 1.22
ATXN3LQ9H3M9 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC22.65■■□□□ 1.22
ATXN3LQ9H3M9 AC009237.3-201ENST00000393279 1427 ntBASIC22.65■■□□□ 1.22
ATXN3LQ9H3M9 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
ATXN3LQ9H3M9 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC22.64■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms