Protein–RNA interactions for Protein: Q9H2X0

CHRD, Chordin, humanhuman

Predictions only

Length 955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDQ9H2X0 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC21.86■■□□□ 1.09
CHRDQ9H2X0 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
CHRDQ9H2X0 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC21.86■■□□□ 1.09
CHRDQ9H2X0 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CHRDQ9H2X0 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CHRDQ9H2X0 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
CHRDQ9H2X0 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21.85■■□□□ 1.09
CHRDQ9H2X0 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CHRDQ9H2X0 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC21.85■■□□□ 1.09
CHRDQ9H2X0 AC138907.5-202ENST00000569484 235 ntBASIC21.85■■□□□ 1.09
CHRDQ9H2X0 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CHRDQ9H2X0 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CHRDQ9H2X0 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CHRDQ9H2X0 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CHRDQ9H2X0 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
CHRDQ9H2X0 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.84■■□□□ 1.09
CHRDQ9H2X0 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
CHRDQ9H2X0 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.84■■□□□ 1.09
CHRDQ9H2X0 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CHRDQ9H2X0 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC21.84■■□□□ 1.09
CHRDQ9H2X0 KRT18P29-201ENST00000397031 1267 ntBASIC21.84■■□□□ 1.09
CHRDQ9H2X0 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC21.84■■□□□ 1.09
CHRDQ9H2X0 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
CHRDQ9H2X0 AC013268.1-206ENST00000638368 961 ntBASIC21.84■■□□□ 1.09
CHRDQ9H2X0 AC112229.1-201ENST00000639295 961 ntBASIC21.84■■□□□ 1.09
CHRDQ9H2X0 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
CHRDQ9H2X0 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
CHRDQ9H2X0 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CHRDQ9H2X0 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC21.83■■□□□ 1.09
CHRDQ9H2X0 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CHRDQ9H2X0 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CHRDQ9H2X0 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CHRDQ9H2X0 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CHRDQ9H2X0 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CHRDQ9H2X0 AC020928.2-201ENST00000588717 2197 ntBASIC21.82■■□□□ 1.08
CHRDQ9H2X0 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CHRDQ9H2X0 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CHRDQ9H2X0 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CHRDQ9H2X0 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CHRDQ9H2X0 RNA5SP413-201ENST00000516373 109 ntBASIC21.82■■□□□ 1.08
CHRDQ9H2X0 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CHRDQ9H2X0 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC21.82■■□□□ 1.08
CHRDQ9H2X0 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC21.82■■□□□ 1.08
CHRDQ9H2X0 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC21.81■■□□□ 1.08
CHRDQ9H2X0 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC21.81■■□□□ 1.08
CHRDQ9H2X0 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC21.81■■□□□ 1.08
CHRDQ9H2X0 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CHRDQ9H2X0 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.81■■□□□ 1.08
CHRDQ9H2X0 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CHRDQ9H2X0 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
CHRDQ9H2X0 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CHRDQ9H2X0 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CHRDQ9H2X0 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CHRDQ9H2X0 PRORSD1P-201ENST00000295112 541 ntBASIC21.8■■□□□ 1.08
CHRDQ9H2X0 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CHRDQ9H2X0 MIPEPP3-201ENST00000412105 444 ntBASIC21.8■■□□□ 1.08
CHRDQ9H2X0 PPP1R14BP2-201ENST00000426284 444 ntBASIC21.8■■□□□ 1.08
CHRDQ9H2X0 UQCRFS1P1-201ENST00000435169 820 ntBASIC21.8■■□□□ 1.08
CHRDQ9H2X0 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC21.8■■□□□ 1.08
CHRDQ9H2X0 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
CHRDQ9H2X0 MARS-234ENST00000630571 216 ntTSL 5 BASIC21.8■■□□□ 1.08
CHRDQ9H2X0 MARS-235ENST00000630803 183 ntTSL 3 BASIC21.8■■□□□ 1.08
CHRDQ9H2X0 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CHRDQ9H2X0 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CHRDQ9H2X0 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CHRDQ9H2X0 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
CHRDQ9H2X0 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
CHRDQ9H2X0 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC21.79■■□□□ 1.08
CHRDQ9H2X0 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CHRDQ9H2X0 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CHRDQ9H2X0 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CHRDQ9H2X0 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
CHRDQ9H2X0 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.79■■□□□ 1.08
CHRDQ9H2X0 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CHRDQ9H2X0 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CHRDQ9H2X0 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
CHRDQ9H2X0 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CHRDQ9H2X0 CYP2T1P-201ENST00000432607 1285 ntBASIC21.79■■□□□ 1.08
CHRDQ9H2X0 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC21.79■■□□□ 1.08
CHRDQ9H2X0 SLC7A5P1-201ENST00000568957 537 ntBASIC21.79■■□□□ 1.08
CHRDQ9H2X0 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC21.79■■□□□ 1.08
CHRDQ9H2X0 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC21.79■■□□□ 1.08
CHRDQ9H2X0 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC21.79■■□□□ 1.08
CHRDQ9H2X0 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CHRDQ9H2X0 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
CHRDQ9H2X0 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CHRDQ9H2X0 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CHRDQ9H2X0 AL139125.2-201ENST00000623134 1869 ntBASIC21.79■■□□□ 1.08
CHRDQ9H2X0 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CHRDQ9H2X0 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC21.79■■□□□ 1.08
CHRDQ9H2X0 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21.79■■□□□ 1.08
CHRDQ9H2X0 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC21.78■■□□□ 1.08
CHRDQ9H2X0 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CHRDQ9H2X0 DUSP8P5-201ENST00000422884 1815 ntBASIC21.78■■□□□ 1.08
CHRDQ9H2X0 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CHRDQ9H2X0 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
CHRDQ9H2X0 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
CHRDQ9H2X0 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
CHRDQ9H2X0 FXN-202ENST00000396364 980 ntTSL 5 BASIC21.78■■□□□ 1.08
CHRDQ9H2X0 BET1L-204ENST00000410108 637 ntTSL 3 BASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms