Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 STX7-201ENST00000367937 1090 ntTSL 5 BASIC22.48■■□□□ 1.19
RNF38Q9H0F5 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
RNF38Q9H0F5 AC006015.1-201ENST00000429970 570 ntBASIC22.48■■□□□ 1.19
RNF38Q9H0F5 AC079140.4-201ENST00000507448 529 ntBASIC22.48■■□□□ 1.19
RNF38Q9H0F5 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC22.48■■□□□ 1.19
RNF38Q9H0F5 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
RNF38Q9H0F5 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC22.48■■□□□ 1.19
RNF38Q9H0F5 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC22.48■■□□□ 1.19
RNF38Q9H0F5 VPS53-216ENST00000574029 585 ntTSL 4 BASIC22.48■■□□□ 1.19
RNF38Q9H0F5 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC22.48■■□□□ 1.19
RNF38Q9H0F5 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
RNF38Q9H0F5 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC22.48■■□□□ 1.19
RNF38Q9H0F5 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC22.48■■□□□ 1.19
RNF38Q9H0F5 COMT-203ENST00000403184 2217 ntTSL 2 BASIC22.47■■□□□ 1.19
RNF38Q9H0F5 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
RNF38Q9H0F5 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC22.47■■□□□ 1.19
RNF38Q9H0F5 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC22.47■■□□□ 1.19
RNF38Q9H0F5 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RNF38Q9H0F5 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC22.47■■□□□ 1.19
RNF38Q9H0F5 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
RNF38Q9H0F5 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RNF38Q9H0F5 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RNF38Q9H0F5 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC22.47■■□□□ 1.19
RNF38Q9H0F5 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC22.47■■□□□ 1.19
RNF38Q9H0F5 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
RNF38Q9H0F5 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
RNF38Q9H0F5 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
RNF38Q9H0F5 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
RNF38Q9H0F5 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
RNF38Q9H0F5 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC22.46■■□□□ 1.19
RNF38Q9H0F5 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC22.46■■□□□ 1.19
RNF38Q9H0F5 DBI-210ENST00000542275 757 ntTSL 5 BASIC22.46■■□□□ 1.19
RNF38Q9H0F5 AC137761.2-201ENST00000561729 223 ntBASIC22.46■■□□□ 1.19
RNF38Q9H0F5 AC145350.3-201ENST00000569033 163 ntBASIC22.46■■□□□ 1.19
RNF38Q9H0F5 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
RNF38Q9H0F5 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC22.46■■□□□ 1.19
RNF38Q9H0F5 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
RNF38Q9H0F5 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC22.46■■□□□ 1.19
RNF38Q9H0F5 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
RNF38Q9H0F5 CASK-201ENST00000378154 2494 ntTSL 5 BASIC22.46■■□□□ 1.19
RNF38Q9H0F5 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
RNF38Q9H0F5 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
RNF38Q9H0F5 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
RNF38Q9H0F5 TESC-206ENST00000541210 936 ntTSL 3 BASIC22.45■■□□□ 1.18
RNF38Q9H0F5 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC22.45■■□□□ 1.18
RNF38Q9H0F5 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
RNF38Q9H0F5 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
RNF38Q9H0F5 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC22.45■■□□□ 1.18
RNF38Q9H0F5 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
RNF38Q9H0F5 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
RNF38Q9H0F5 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
RNF38Q9H0F5 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
RNF38Q9H0F5 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
RNF38Q9H0F5 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC22.44■■□□□ 1.18
RNF38Q9H0F5 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
RNF38Q9H0F5 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
RNF38Q9H0F5 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC22.44■■□□□ 1.18
RNF38Q9H0F5 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC22.44■■□□□ 1.18
RNF38Q9H0F5 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
RNF38Q9H0F5 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC22.44■■□□□ 1.18
RNF38Q9H0F5 AP004607.7-201ENST00000527152 1677 ntBASIC22.44■■□□□ 1.18
RNF38Q9H0F5 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC22.44■■□□□ 1.18
RNF38Q9H0F5 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
RNF38Q9H0F5 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC22.44■■□□□ 1.18
RNF38Q9H0F5 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
RNF38Q9H0F5 AC137767.1-201ENST00000602918 1920 ntBASIC22.43■■□□□ 1.18
RNF38Q9H0F5 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
RNF38Q9H0F5 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
RNF38Q9H0F5 OR7E47P-201ENST00000546390 1422 ntBASIC22.43■■□□□ 1.18
RNF38Q9H0F5 HSCB-202ENST00000398941 955 ntTSL 2 BASIC22.43■■□□□ 1.18
RNF38Q9H0F5 KRT19P1-201ENST00000405746 1186 ntBASIC22.43■■□□□ 1.18
RNF38Q9H0F5 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
RNF38Q9H0F5 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
RNF38Q9H0F5 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
RNF38Q9H0F5 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
RNF38Q9H0F5 AC055733.4-201ENST00000638462 1354 ntBASIC22.42■■□□□ 1.18
RNF38Q9H0F5 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC22.42■■□□□ 1.18
RNF38Q9H0F5 AC016769.1-201ENST00000409132 1010 ntBASIC22.42■■□□□ 1.18
RNF38Q9H0F5 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC22.42■■□□□ 1.18
RNF38Q9H0F5 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
RNF38Q9H0F5 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
RNF38Q9H0F5 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC22.42■■□□□ 1.18
RNF38Q9H0F5 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC22.42■■□□□ 1.18
RNF38Q9H0F5 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC22.42■■□□□ 1.18
RNF38Q9H0F5 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC22.41■■□□□ 1.18
RNF38Q9H0F5 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
RNF38Q9H0F5 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
RNF38Q9H0F5 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
RNF38Q9H0F5 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC22.41■■□□□ 1.18
RNF38Q9H0F5 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
RNF38Q9H0F5 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC22.41■■□□□ 1.18
RNF38Q9H0F5 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
RNF38Q9H0F5 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC22.41■■□□□ 1.18
RNF38Q9H0F5 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
RNF38Q9H0F5 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
RNF38Q9H0F5 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC22.41■■□□□ 1.18
RNF38Q9H0F5 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC22.41■■□□□ 1.18
RNF38Q9H0F5 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
RNF38Q9H0F5 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC22.41■■□□□ 1.18
RNF38Q9H0F5 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC22.41■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms