Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
PCDH11XQ9BZA7 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC28.36■■■□□ 2.13
PCDH11XQ9BZA7 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC28.36■■■□□ 2.13
PCDH11XQ9BZA7 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC28.36■■■□□ 2.13
PCDH11XQ9BZA7 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC28.36■■■□□ 2.13
PCDH11XQ9BZA7 SLC29A4P1-201ENST00000398760 971 ntBASIC28.36■■■□□ 2.13
PCDH11XQ9BZA7 AC010141.2-201ENST00000452426 721 ntBASIC28.36■■■□□ 2.13
PCDH11XQ9BZA7 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC28.36■■■□□ 2.13
PCDH11XQ9BZA7 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC28.35■■■□□ 2.13
PCDH11XQ9BZA7 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC28.35■■■□□ 2.13
PCDH11XQ9BZA7 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC28.35■■■□□ 2.13
PCDH11XQ9BZA7 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC28.35■■■□□ 2.13
PCDH11XQ9BZA7 TSPY20P-201ENST00000450910 630 ntBASIC28.35■■■□□ 2.13
PCDH11XQ9BZA7 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC28.35■■■□□ 2.13
PCDH11XQ9BZA7 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC28.35■■■□□ 2.13
PCDH11XQ9BZA7 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC28.35■■■□□ 2.13
PCDH11XQ9BZA7 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC28.35■■■□□ 2.13
PCDH11XQ9BZA7 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
PCDH11XQ9BZA7 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC28.34■■■□□ 2.13
PCDH11XQ9BZA7 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC28.34■■■□□ 2.13
PCDH11XQ9BZA7 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
PCDH11XQ9BZA7 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC28.34■■■□□ 2.13
PCDH11XQ9BZA7 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC28.34■■■□□ 2.13
PCDH11XQ9BZA7 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC28.34■■■□□ 2.13
PCDH11XQ9BZA7 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
PCDH11XQ9BZA7 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
PCDH11XQ9BZA7 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC28.33■■■□□ 2.13
PCDH11XQ9BZA7 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
PCDH11XQ9BZA7 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC28.33■■■□□ 2.13
PCDH11XQ9BZA7 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC28.33■■■□□ 2.13
PCDH11XQ9BZA7 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC28.33■■■□□ 2.13
PCDH11XQ9BZA7 KLF13-207ENST00000560473 489 ntTSL 3 BASIC28.33■■■□□ 2.13
PCDH11XQ9BZA7 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC28.33■■■□□ 2.13
PCDH11XQ9BZA7 AC138907.5-202ENST00000569484 235 ntBASIC28.33■■■□□ 2.13
PCDH11XQ9BZA7 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC28.33■■■□□ 2.13
PCDH11XQ9BZA7 PFKL-212ENST00000628044 129 ntTSL 3 BASIC28.33■■■□□ 2.13
PCDH11XQ9BZA7 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
PCDH11XQ9BZA7 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
PCDH11XQ9BZA7 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC28.32■■■□□ 2.12
PCDH11XQ9BZA7 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC28.32■■■□□ 2.12
PCDH11XQ9BZA7 AC079089.2-201ENST00000531211 1277 ntBASIC28.32■■■□□ 2.12
PCDH11XQ9BZA7 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC28.32■■■□□ 2.12
PCDH11XQ9BZA7 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
PCDH11XQ9BZA7 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
PCDH11XQ9BZA7 AC092068.2-201ENST00000590491 1708 ntBASIC28.31■■■□□ 2.12
PCDH11XQ9BZA7 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
PCDH11XQ9BZA7 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
PCDH11XQ9BZA7 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
PCDH11XQ9BZA7 KRT18P20-201ENST00000548986 1279 ntBASIC28.31■■■□□ 2.12
PCDH11XQ9BZA7 LINC01960-201ENST00000563759 1884 ntBASIC28.31■■■□□ 2.12
PCDH11XQ9BZA7 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
PCDH11XQ9BZA7 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC28.3■■■□□ 2.12
PCDH11XQ9BZA7 ANOS2P-203ENST00000472227 1816 ntBASIC28.3■■■□□ 2.12
PCDH11XQ9BZA7 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
PCDH11XQ9BZA7 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC28.3■■■□□ 2.12
PCDH11XQ9BZA7 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC28.3■■■□□ 2.12
PCDH11XQ9BZA7 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC28.3■■■□□ 2.12
PCDH11XQ9BZA7 AC069152.1-201ENST00000438030 544 ntBASIC28.3■■■□□ 2.12
PCDH11XQ9BZA7 AC010536.3-201ENST00000620306 533 ntBASIC28.3■■■□□ 2.12
PCDH11XQ9BZA7 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC28.3■■■□□ 2.12
PCDH11XQ9BZA7 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC28.3■■■□□ 2.12
PCDH11XQ9BZA7 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC28.3■■■□□ 2.12
PCDH11XQ9BZA7 PREB-202ENST00000406567 1910 ntTSL 5 BASIC28.29■■■□□ 2.12
PCDH11XQ9BZA7 APTR-203ENST00000430801 583 ntTSL 5 BASIC28.29■■■□□ 2.12
PCDH11XQ9BZA7 RGMA-211ENST00000557420 989 ntTSL 3 BASIC28.29■■■□□ 2.12
PCDH11XQ9BZA7 AC133552.2-202ENST00000575694 574 ntBASIC28.29■■■□□ 2.12
PCDH11XQ9BZA7 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC28.29■■■□□ 2.12
PCDH11XQ9BZA7 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
PCDH11XQ9BZA7 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
PCDH11XQ9BZA7 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
PCDH11XQ9BZA7 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC28.28■■■□□ 2.12
PCDH11XQ9BZA7 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC28.28■■■□□ 2.12
PCDH11XQ9BZA7 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
PCDH11XQ9BZA7 FXN-202ENST00000396364 980 ntTSL 5 BASIC28.28■■■□□ 2.12
PCDH11XQ9BZA7 AF201337.1-201ENST00000520239 748 ntBASIC28.28■■■□□ 2.12
PCDH11XQ9BZA7 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC28.27■■■□□ 2.12
PCDH11XQ9BZA7 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC28.27■■■□□ 2.12
PCDH11XQ9BZA7 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
PCDH11XQ9BZA7 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
PCDH11XQ9BZA7 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
PCDH11XQ9BZA7 AP004607.7-201ENST00000527152 1677 ntBASIC28.27■■■□□ 2.12
PCDH11XQ9BZA7 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC28.26■■■□□ 2.12
PCDH11XQ9BZA7 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC28.26■■■□□ 2.11
PCDH11XQ9BZA7 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC28.26■■■□□ 2.11
PCDH11XQ9BZA7 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC28.26■■■□□ 2.11
PCDH11XQ9BZA7 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
PCDH11XQ9BZA7 MIR4651-201ENST00000582622 73 ntBASIC28.26■■■□□ 2.11
PCDH11XQ9BZA7 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
PCDH11XQ9BZA7 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
PCDH11XQ9BZA7 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC28.26■■■□□ 2.11
PCDH11XQ9BZA7 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC28.26■■■□□ 2.11
PCDH11XQ9BZA7 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC28.26■■■□□ 2.11
PCDH11XQ9BZA7 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
PCDH11XQ9BZA7 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC28.26■■■□□ 2.11
PCDH11XQ9BZA7 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
PCDH11XQ9BZA7 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC28.25■■■□□ 2.11
PCDH11XQ9BZA7 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC28.25■■■□□ 2.11
PCDH11XQ9BZA7 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC28.25■■■□□ 2.11
PCDH11XQ9BZA7 AC073210.2-201ENST00000430369 194 ntBASIC28.25■■■□□ 2.11
PCDH11XQ9BZA7 UQCRFS1P1-201ENST00000435169 820 ntBASIC28.25■■■□□ 2.11
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms