Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
LCE3DQ9BYE3 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
LCE3DQ9BYE3 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC5.83□□□□□ -1.48
LCE3DQ9BYE3 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
LCE3DQ9BYE3 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
LCE3DQ9BYE3 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC5.83□□□□□ -1.48
LCE3DQ9BYE3 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
LCE3DQ9BYE3 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
LCE3DQ9BYE3 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
LCE3DQ9BYE3 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
LCE3DQ9BYE3 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
LCE3DQ9BYE3 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
LCE3DQ9BYE3 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
LCE3DQ9BYE3 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC5.83□□□□□ -1.48
LCE3DQ9BYE3 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC5.83□□□□□ -1.48
LCE3DQ9BYE3 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
LCE3DQ9BYE3 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
LCE3DQ9BYE3 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
LCE3DQ9BYE3 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
LCE3DQ9BYE3 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
LCE3DQ9BYE3 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
LCE3DQ9BYE3 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
LCE3DQ9BYE3 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
LCE3DQ9BYE3 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
LCE3DQ9BYE3 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC5.82□□□□□ -1.48
LCE3DQ9BYE3 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
LCE3DQ9BYE3 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
LCE3DQ9BYE3 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
LCE3DQ9BYE3 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC5.82□□□□□ -1.48
LCE3DQ9BYE3 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
LCE3DQ9BYE3 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
LCE3DQ9BYE3 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
LCE3DQ9BYE3 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
LCE3DQ9BYE3 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
LCE3DQ9BYE3 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
LCE3DQ9BYE3 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
LCE3DQ9BYE3 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
LCE3DQ9BYE3 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
LCE3DQ9BYE3 AC010542.4-201ENST00000563151 1910 ntBASIC5.82□□□□□ -1.48
LCE3DQ9BYE3 AL353803.4-201ENST00000565882 1934 ntBASIC5.82□□□□□ -1.48
LCE3DQ9BYE3 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
LCE3DQ9BYE3 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
LCE3DQ9BYE3 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC5.82□□□□□ -1.48
LCE3DQ9BYE3 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
LCE3DQ9BYE3 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC5.82□□□□□ -1.48
LCE3DQ9BYE3 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC5.82□□□□□ -1.48
LCE3DQ9BYE3 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC5.82□□□□□ -1.48
LCE3DQ9BYE3 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
LCE3DQ9BYE3 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
LCE3DQ9BYE3 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC5.82□□□□□ -1.48
LCE3DQ9BYE3 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
LCE3DQ9BYE3 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
LCE3DQ9BYE3 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC5.82□□□□□ -1.48
LCE3DQ9BYE3 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
LCE3DQ9BYE3 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
LCE3DQ9BYE3 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC5.82□□□□□ -1.48
LCE3DQ9BYE3 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
LCE3DQ9BYE3 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
LCE3DQ9BYE3 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
LCE3DQ9BYE3 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC5.82□□□□□ -1.48
LCE3DQ9BYE3 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
LCE3DQ9BYE3 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC5.82□□□□□ -1.48
LCE3DQ9BYE3 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC5.82□□□□□ -1.48
LCE3DQ9BYE3 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
LCE3DQ9BYE3 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
LCE3DQ9BYE3 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
LCE3DQ9BYE3 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
LCE3DQ9BYE3 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC5.82□□□□□ -1.48
LCE3DQ9BYE3 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
LCE3DQ9BYE3 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
LCE3DQ9BYE3 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
LCE3DQ9BYE3 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC5.81□□□□□ -1.48
LCE3DQ9BYE3 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
LCE3DQ9BYE3 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
LCE3DQ9BYE3 AC244015.2-201ENST00000616358 1861 ntBASIC5.81□□□□□ -1.48
LCE3DQ9BYE3 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
LCE3DQ9BYE3 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
LCE3DQ9BYE3 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
LCE3DQ9BYE3 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
LCE3DQ9BYE3 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
LCE3DQ9BYE3 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
LCE3DQ9BYE3 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
LCE3DQ9BYE3 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
LCE3DQ9BYE3 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
LCE3DQ9BYE3 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC5.81□□□□□ -1.48
LCE3DQ9BYE3 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC5.81□□□□□ -1.48
LCE3DQ9BYE3 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
LCE3DQ9BYE3 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
LCE3DQ9BYE3 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
LCE3DQ9BYE3 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC5.81□□□□□ -1.48
LCE3DQ9BYE3 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
LCE3DQ9BYE3 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
LCE3DQ9BYE3 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
LCE3DQ9BYE3 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
LCE3DQ9BYE3 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
LCE3DQ9BYE3 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
LCE3DQ9BYE3 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC5.81□□□□□ -1.48
LCE3DQ9BYE3 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
LCE3DQ9BYE3 AL592295.1-201ENST00000400984 884 ntBASIC5.81□□□□□ -1.48
LCE3DQ9BYE3 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms