Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHRDL1Q9BU40 MED17-221ENST00000639724 2317 ntTSL 5 BASIC17.07■□□□□ 0.32
CHRDL1Q9BU40 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHRDL1Q9BU40 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
CHRDL1Q9BU40 AC006455.2-201ENST00000429931 906 ntBASIC17.07■□□□□ 0.32
CHRDL1Q9BU40 SRR-208ENST00000576848 588 ntTSL 4 BASIC17.07■□□□□ 0.32
CHRDL1Q9BU40 AC241377.3-202ENST00000626088 1088 ntBASIC17.07■□□□□ 0.32
CHRDL1Q9BU40 AC241585.3-202ENST00000628937 1088 ntBASIC17.07■□□□□ 0.32
CHRDL1Q9BU40 AC245100.8-202ENST00000629247 1058 ntBASIC17.07■□□□□ 0.32
CHRDL1Q9BU40 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHRDL1Q9BU40 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHRDL1Q9BU40 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC17.07■□□□□ 0.32
CHRDL1Q9BU40 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHRDL1Q9BU40 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHRDL1Q9BU40 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC17.07■□□□□ 0.32
CHRDL1Q9BU40 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CHRDL1Q9BU40 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHRDL1Q9BU40 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
CHRDL1Q9BU40 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CHRDL1Q9BU40 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
CHRDL1Q9BU40 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
CHRDL1Q9BU40 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC17.06■□□□□ 0.32
CHRDL1Q9BU40 GATM-206ENST00000558336 1522 ntTSL 2 BASIC17.06■□□□□ 0.32
CHRDL1Q9BU40 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CHRDL1Q9BU40 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
CHRDL1Q9BU40 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CHRDL1Q9BU40 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CHRDL1Q9BU40 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CHRDL1Q9BU40 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CHRDL1Q9BU40 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC17.06■□□□□ 0.32
CHRDL1Q9BU40 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.06■□□□□ 0.32
CHRDL1Q9BU40 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CHRDL1Q9BU40 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CHRDL1Q9BU40 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC17.06■□□□□ 0.32
CHRDL1Q9BU40 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CHRDL1Q9BU40 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC17.06■□□□□ 0.32
CHRDL1Q9BU40 AL512631.2-201ENST00000604634 923 ntBASIC17.06■□□□□ 0.32
CHRDL1Q9BU40 AC099791.2-201ENST00000605725 427 ntBASIC17.06■□□□□ 0.32
CHRDL1Q9BU40 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CHRDL1Q9BU40 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CHRDL1Q9BU40 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CHRDL1Q9BU40 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CHRDL1Q9BU40 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
CHRDL1Q9BU40 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CHRDL1Q9BU40 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CHRDL1Q9BU40 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC17.06■□□□□ 0.32
CHRDL1Q9BU40 GTSE1-AS1-202ENST00000623117 1518 ntBASIC17.06■□□□□ 0.32
CHRDL1Q9BU40 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHRDL1Q9BU40 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHRDL1Q9BU40 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHRDL1Q9BU40 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CHRDL1Q9BU40 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHRDL1Q9BU40 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHRDL1Q9BU40 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CHRDL1Q9BU40 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CHRDL1Q9BU40 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC17.05■□□□□ 0.32
CHRDL1Q9BU40 AL499627.2-201ENST00000606283 725 ntBASIC17.05■□□□□ 0.32
CHRDL1Q9BU40 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHRDL1Q9BU40 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHRDL1Q9BU40 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHRDL1Q9BU40 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
CHRDL1Q9BU40 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC17.04■□□□□ 0.32
CHRDL1Q9BU40 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHRDL1Q9BU40 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHRDL1Q9BU40 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
CHRDL1Q9BU40 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHRDL1Q9BU40 LINC01960-201ENST00000563759 1884 ntBASIC17.04■□□□□ 0.32
CHRDL1Q9BU40 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHRDL1Q9BU40 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHRDL1Q9BU40 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CHRDL1Q9BU40 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHRDL1Q9BU40 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC17.04■□□□□ 0.32
CHRDL1Q9BU40 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC17.04■□□□□ 0.32
CHRDL1Q9BU40 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC17.04■□□□□ 0.32
CHRDL1Q9BU40 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CHRDL1Q9BU40 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC17.04■□□□□ 0.32
CHRDL1Q9BU40 TRIR-202ENST00000588213 841 ntTSL 3 BASIC17.04■□□□□ 0.32
CHRDL1Q9BU40 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC17.04■□□□□ 0.32
CHRDL1Q9BU40 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC17.04■□□□□ 0.32
CHRDL1Q9BU40 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHRDL1Q9BU40 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC17.04■□□□□ 0.32
CHRDL1Q9BU40 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC17.04■□□□□ 0.32
CHRDL1Q9BU40 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHRDL1Q9BU40 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC17.03■□□□□ 0.32
CHRDL1Q9BU40 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC17.03■□□□□ 0.32
CHRDL1Q9BU40 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CHRDL1Q9BU40 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHRDL1Q9BU40 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CHRDL1Q9BU40 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHRDL1Q9BU40 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CHRDL1Q9BU40 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHRDL1Q9BU40 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC17.03■□□□□ 0.32
CHRDL1Q9BU40 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHRDL1Q9BU40 RPP21-222ENST00000433076 577 ntTSL 2 BASIC17.03■□□□□ 0.32
CHRDL1Q9BU40 SRD5A1P1-201ENST00000442297 786 ntBASIC17.03■□□□□ 0.32
CHRDL1Q9BU40 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC17.03■□□□□ 0.32
CHRDL1Q9BU40 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHRDL1Q9BU40 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.03■□□□□ 0.32
CHRDL1Q9BU40 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHRDL1Q9BU40 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms