Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.15■□□□□ 0.66
USB1Q9BQ65 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC19.15■□□□□ 0.66
USB1Q9BQ65 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.15■□□□□ 0.66
USB1Q9BQ65 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.15■□□□□ 0.66
USB1Q9BQ65 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
USB1Q9BQ65 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
USB1Q9BQ65 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
USB1Q9BQ65 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
USB1Q9BQ65 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
USB1Q9BQ65 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
USB1Q9BQ65 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
USB1Q9BQ65 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
USB1Q9BQ65 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
USB1Q9BQ65 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.14■□□□□ 0.66
USB1Q9BQ65 ANOS2P-203ENST00000472227 1816 ntBASIC19.14■□□□□ 0.65
USB1Q9BQ65 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC19.14■□□□□ 0.65
USB1Q9BQ65 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.14■□□□□ 0.65
USB1Q9BQ65 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.14■□□□□ 0.65
USB1Q9BQ65 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
USB1Q9BQ65 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
USB1Q9BQ65 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.14■□□□□ 0.65
USB1Q9BQ65 ANKRD20A6P-201ENST00000618763 204 ntBASIC19.14■□□□□ 0.65
USB1Q9BQ65 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.14■□□□□ 0.65
USB1Q9BQ65 LINC02228-203ENST00000641970 1355 ntBASIC19.14■□□□□ 0.65
USB1Q9BQ65 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
USB1Q9BQ65 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.14■□□□□ 0.65
USB1Q9BQ65 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.14■□□□□ 0.65
USB1Q9BQ65 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
USB1Q9BQ65 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.14■□□□□ 0.65
USB1Q9BQ65 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
USB1Q9BQ65 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.14■□□□□ 0.65
USB1Q9BQ65 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.14■□□□□ 0.65
USB1Q9BQ65 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
USB1Q9BQ65 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
USB1Q9BQ65 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
USB1Q9BQ65 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
USB1Q9BQ65 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
USB1Q9BQ65 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.13■□□□□ 0.65
USB1Q9BQ65 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
USB1Q9BQ65 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
USB1Q9BQ65 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC19.13■□□□□ 0.65
USB1Q9BQ65 AC087623.3-201ENST00000607047 1098 ntBASIC19.13■□□□□ 0.65
USB1Q9BQ65 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.13■□□□□ 0.65
USB1Q9BQ65 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.13■□□□□ 0.65
USB1Q9BQ65 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.13■□□□□ 0.65
USB1Q9BQ65 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
USB1Q9BQ65 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
USB1Q9BQ65 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
USB1Q9BQ65 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
USB1Q9BQ65 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.13■□□□□ 0.65
USB1Q9BQ65 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
USB1Q9BQ65 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
USB1Q9BQ65 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
USB1Q9BQ65 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
USB1Q9BQ65 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.13■□□□□ 0.65
USB1Q9BQ65 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
USB1Q9BQ65 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
USB1Q9BQ65 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
USB1Q9BQ65 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
USB1Q9BQ65 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.12■□□□□ 0.65
USB1Q9BQ65 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.12■□□□□ 0.65
USB1Q9BQ65 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
USB1Q9BQ65 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
USB1Q9BQ65 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
USB1Q9BQ65 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
USB1Q9BQ65 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
USB1Q9BQ65 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
USB1Q9BQ65 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
USB1Q9BQ65 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
USB1Q9BQ65 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.11■□□□□ 0.65
USB1Q9BQ65 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.11■□□□□ 0.65
USB1Q9BQ65 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
USB1Q9BQ65 OXCT2P1-201ENST00000447263 1535 ntBASIC19.11■□□□□ 0.65
USB1Q9BQ65 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.11■□□□□ 0.65
USB1Q9BQ65 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
USB1Q9BQ65 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
USB1Q9BQ65 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
USB1Q9BQ65 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
USB1Q9BQ65 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
USB1Q9BQ65 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
USB1Q9BQ65 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.11■□□□□ 0.65
USB1Q9BQ65 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.11■□□□□ 0.65
USB1Q9BQ65 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.11■□□□□ 0.65
USB1Q9BQ65 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
USB1Q9BQ65 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
USB1Q9BQ65 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
USB1Q9BQ65 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
USB1Q9BQ65 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
USB1Q9BQ65 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
USB1Q9BQ65 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC19.11■□□□□ 0.65
USB1Q9BQ65 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.11■□□□□ 0.65
USB1Q9BQ65 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
USB1Q9BQ65 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
USB1Q9BQ65 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.1■□□□□ 0.65
USB1Q9BQ65 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
USB1Q9BQ65 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
USB1Q9BQ65 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
USB1Q9BQ65 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.1■□□□□ 0.65
USB1Q9BQ65 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.1■□□□□ 0.65
USB1Q9BQ65 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms