Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VGLL1Q99990 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VGLL1Q99990 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VGLL1Q99990 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC16.32■□□□□ 0.2
VGLL1Q99990 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VGLL1Q99990 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VGLL1Q99990 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
VGLL1Q99990 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VGLL1Q99990 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
VGLL1Q99990 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VGLL1Q99990 MIR4787-201ENST00000607364 84 ntBASIC16.32■□□□□ 0.2
VGLL1Q99990 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VGLL1Q99990 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VGLL1Q99990 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
VGLL1Q99990 PALM-208ENST00000592155 2272 ntTSL 4 BASIC16.31■□□□□ 0.2
VGLL1Q99990 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
VGLL1Q99990 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
VGLL1Q99990 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VGLL1Q99990 VGF-203ENST00000611537 1622 ntTSL 5 BASIC16.31■□□□□ 0.2
VGLL1Q99990 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC16.31■□□□□ 0.2
VGLL1Q99990 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
VGLL1Q99990 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VGLL1Q99990 TFPT-201ENST00000391757 774 ntTSL 5 BASIC16.31■□□□□ 0.2
VGLL1Q99990 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
VGLL1Q99990 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
VGLL1Q99990 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC16.31■□□□□ 0.2
VGLL1Q99990 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
VGLL1Q99990 Z92544.1-202ENST00000571933 1220 ntBASIC16.31■□□□□ 0.2
VGLL1Q99990 AC005229.4-201ENST00000610085 2198 ntBASIC16.31■□□□□ 0.2
VGLL1Q99990 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
VGLL1Q99990 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VGLL1Q99990 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VGLL1Q99990 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VGLL1Q99990 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
VGLL1Q99990 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VGLL1Q99990 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
VGLL1Q99990 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC16.3■□□□□ 0.2
VGLL1Q99990 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
VGLL1Q99990 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VGLL1Q99990 ME2-206ENST00000638410 2289 ntTSL 5 BASIC16.3■□□□□ 0.2
VGLL1Q99990 ME2-210ENST00000639255 2262 ntTSL 5 BASIC16.3■□□□□ 0.2
VGLL1Q99990 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
VGLL1Q99990 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
VGLL1Q99990 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
VGLL1Q99990 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
VGLL1Q99990 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
VGLL1Q99990 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
VGLL1Q99990 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC16.3■□□□□ 0.2
VGLL1Q99990 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC16.3■□□□□ 0.2
VGLL1Q99990 AC010997.5-201ENST00000609182 354 ntBASIC16.3■□□□□ 0.2
VGLL1Q99990 EXOG-217ENST00000630638 197 ntTSL 5 BASIC16.3■□□□□ 0.2
VGLL1Q99990 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VGLL1Q99990 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VGLL1Q99990 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VGLL1Q99990 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC16.3■□□□□ 0.2
VGLL1Q99990 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VGLL1Q99990 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VGLL1Q99990 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC16.3■□□□□ 0.2
VGLL1Q99990 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
VGLL1Q99990 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC16.3■□□□□ 0.2
VGLL1Q99990 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VGLL1Q99990 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC16.29■□□□□ 0.2
VGLL1Q99990 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
VGLL1Q99990 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
VGLL1Q99990 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
VGLL1Q99990 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
VGLL1Q99990 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VGLL1Q99990 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VGLL1Q99990 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VGLL1Q99990 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VGLL1Q99990 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC16.29■□□□□ 0.2
VGLL1Q99990 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC16.29■□□□□ 0.2
VGLL1Q99990 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC16.29■□□□□ 0.2
VGLL1Q99990 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
VGLL1Q99990 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VGLL1Q99990 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VGLL1Q99990 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
VGLL1Q99990 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
VGLL1Q99990 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VGLL1Q99990 AC244015.2-201ENST00000616358 1861 ntBASIC16.29■□□□□ 0.2
VGLL1Q99990 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC16.29■□□□□ 0.2
VGLL1Q99990 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VGLL1Q99990 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VGLL1Q99990 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VGLL1Q99990 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
VGLL1Q99990 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
VGLL1Q99990 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
VGLL1Q99990 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VGLL1Q99990 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
VGLL1Q99990 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC16.28■□□□□ 0.2
VGLL1Q99990 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC16.28■□□□□ 0.2
VGLL1Q99990 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
VGLL1Q99990 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
VGLL1Q99990 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC16.28■□□□□ 0.2
VGLL1Q99990 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
VGLL1Q99990 TSPY9P-201ENST00000440215 945 ntBASIC16.28■□□□□ 0.2
VGLL1Q99990 TSPY11P-201ENST00000442607 1045 ntBASIC16.28■□□□□ 0.2
VGLL1Q99990 AC239859.2-201ENST00000444165 318 ntBASIC16.28■□□□□ 0.2
VGLL1Q99990 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC16.28■□□□□ 0.2
VGLL1Q99990 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms