Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.27■□□□□ 0.52
FOXC2Q99958 AL596275.1-201ENST00000423464 877 ntBASIC18.27■□□□□ 0.52
FOXC2Q99958 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC18.27■□□□□ 0.52
FOXC2Q99958 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.27■□□□□ 0.52
FOXC2Q99958 RARRES2P4-201ENST00000514074 484 ntBASIC18.27■□□□□ 0.52
FOXC2Q99958 ADM-205ENST00000528544 586 ntTSL 2 BASIC18.27■□□□□ 0.52
FOXC2Q99958 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
FOXC2Q99958 AC092118.2-201ENST00000613495 667 ntBASIC18.27■□□□□ 0.52
FOXC2Q99958 AC013268.1-206ENST00000638368 961 ntBASIC18.27■□□□□ 0.52
FOXC2Q99958 AC112229.1-201ENST00000639295 961 ntBASIC18.27■□□□□ 0.52
FOXC2Q99958 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
FOXC2Q99958 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
FOXC2Q99958 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC18.27■□□□□ 0.51
FOXC2Q99958 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
FOXC2Q99958 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
FOXC2Q99958 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC18.26■□□□□ 0.51
FOXC2Q99958 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
FOXC2Q99958 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC18.26■□□□□ 0.51
FOXC2Q99958 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
FOXC2Q99958 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
FOXC2Q99958 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.26■□□□□ 0.51
FOXC2Q99958 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
FOXC2Q99958 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
FOXC2Q99958 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
FOXC2Q99958 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
FOXC2Q99958 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC18.25■□□□□ 0.51
FOXC2Q99958 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
FOXC2Q99958 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
FOXC2Q99958 MFF-207ENST00000409565 1548 ntTSL 2 BASIC18.25■□□□□ 0.51
FOXC2Q99958 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC18.25■□□□□ 0.51
FOXC2Q99958 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.25■□□□□ 0.51
FOXC2Q99958 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
FOXC2Q99958 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC18.25■□□□□ 0.51
FOXC2Q99958 ESRRAP1-201ENST00000400596 1257 ntBASIC18.25■□□□□ 0.51
FOXC2Q99958 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.25■□□□□ 0.51
FOXC2Q99958 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC18.25■□□□□ 0.51
FOXC2Q99958 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
FOXC2Q99958 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
FOXC2Q99958 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.25■□□□□ 0.51
FOXC2Q99958 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.25■□□□□ 0.51
FOXC2Q99958 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
FOXC2Q99958 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
FOXC2Q99958 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC18.25■□□□□ 0.51
FOXC2Q99958 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
FOXC2Q99958 EI24-213ENST00000618552 1747 ntTSL 5 BASIC18.24■□□□□ 0.51
FOXC2Q99958 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
FOXC2Q99958 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
FOXC2Q99958 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
FOXC2Q99958 SERP1-208ENST00000491660 830 ntTSL 2 BASIC18.24■□□□□ 0.51
FOXC2Q99958 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.24■□□□□ 0.51
FOXC2Q99958 AC142381.4-202ENST00000563973 229 ntBASIC18.24■□□□□ 0.51
FOXC2Q99958 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
FOXC2Q99958 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.24■□□□□ 0.51
FOXC2Q99958 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.24■□□□□ 0.51
FOXC2Q99958 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
FOXC2Q99958 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
FOXC2Q99958 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC18.24■□□□□ 0.51
FOXC2Q99958 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
FOXC2Q99958 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC18.23■□□□□ 0.51
FOXC2Q99958 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
FOXC2Q99958 AL158047.1-201ENST00000445918 881 ntBASIC18.23■□□□□ 0.51
FOXC2Q99958 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC18.23■□□□□ 0.51
FOXC2Q99958 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC18.23■□□□□ 0.51
FOXC2Q99958 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.23■□□□□ 0.51
FOXC2Q99958 OR10C1-204ENST00000622521 1039 ntBASIC18.23■□□□□ 0.51
FOXC2Q99958 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
FOXC2Q99958 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
FOXC2Q99958 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
FOXC2Q99958 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
FOXC2Q99958 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
FOXC2Q99958 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
FOXC2Q99958 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
FOXC2Q99958 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
FOXC2Q99958 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC18.22■□□□□ 0.51
FOXC2Q99958 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC18.22■□□□□ 0.51
FOXC2Q99958 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC18.22■□□□□ 0.51
FOXC2Q99958 CYP2T1P-201ENST00000432607 1285 ntBASIC18.22■□□□□ 0.51
FOXC2Q99958 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.22■□□□□ 0.51
FOXC2Q99958 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
FOXC2Q99958 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC18.22■□□□□ 0.51
FOXC2Q99958 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
FOXC2Q99958 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
FOXC2Q99958 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
FOXC2Q99958 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
FOXC2Q99958 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
FOXC2Q99958 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
FOXC2Q99958 USP45-205ENST00000472914 1617 ntTSL 5 BASIC18.21■□□□□ 0.51
FOXC2Q99958 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
FOXC2Q99958 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.21■□□□□ 0.51
FOXC2Q99958 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.21■□□□□ 0.51
FOXC2Q99958 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.21■□□□□ 0.51
FOXC2Q99958 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
FOXC2Q99958 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
FOXC2Q99958 AC010141.2-201ENST00000452426 721 ntBASIC18.21■□□□□ 0.51
FOXC2Q99958 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.21■□□□□ 0.51
FOXC2Q99958 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
FOXC2Q99958 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
FOXC2Q99958 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
FOXC2Q99958 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
FOXC2Q99958 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms