Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CPNE1Q99829 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CPNE1Q99829 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CPNE1Q99829 EI24-211ENST00000534546 1544 ntTSL 2 BASIC21.6■■□□□ 1.05
CPNE1Q99829 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CPNE1Q99829 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CPNE1Q99829 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CPNE1Q99829 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CPNE1Q99829 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
CPNE1Q99829 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CPNE1Q99829 MIR3621-201ENST00000580529 85 ntBASIC21.6■■□□□ 1.05
CPNE1Q99829 AC068587.7-201ENST00000641602 218 ntBASIC21.6■■□□□ 1.05
CPNE1Q99829 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.6■■□□□ 1.05
CPNE1Q99829 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CPNE1Q99829 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
CPNE1Q99829 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CPNE1Q99829 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CPNE1Q99829 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC21.6■■□□□ 1.05
CPNE1Q99829 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
CPNE1Q99829 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CPNE1Q99829 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CPNE1Q99829 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CPNE1Q99829 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CPNE1Q99829 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CPNE1Q99829 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.59■■□□□ 1.05
CPNE1Q99829 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CPNE1Q99829 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CPNE1Q99829 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
CPNE1Q99829 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC21.59■■□□□ 1.05
CPNE1Q99829 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
CPNE1Q99829 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
CPNE1Q99829 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CPNE1Q99829 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CPNE1Q99829 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
CPNE1Q99829 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC21.59■■□□□ 1.05
CPNE1Q99829 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CPNE1Q99829 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CPNE1Q99829 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CPNE1Q99829 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CPNE1Q99829 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CPNE1Q99829 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.58■■□□□ 1.05
CPNE1Q99829 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.58■■□□□ 1.05
CPNE1Q99829 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CPNE1Q99829 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
CPNE1Q99829 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CPNE1Q99829 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC21.58■■□□□ 1.05
CPNE1Q99829 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
CPNE1Q99829 GUSBP5-201ENST00000418136 578 ntBASIC21.58■■□□□ 1.05
CPNE1Q99829 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
CPNE1Q99829 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CPNE1Q99829 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC21.58■■□□□ 1.05
CPNE1Q99829 MIR3181-201ENST00000578512 73 ntBASIC21.58■■□□□ 1.05
CPNE1Q99829 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC21.58■■□□□ 1.05
CPNE1Q99829 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CPNE1Q99829 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
CPNE1Q99829 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
CPNE1Q99829 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.58■■□□□ 1.04
CPNE1Q99829 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
CPNE1Q99829 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CPNE1Q99829 OR7E47P-201ENST00000546390 1422 ntBASIC21.57■■□□□ 1.04
CPNE1Q99829 RBM38-205ENST00000440234 686 ntTSL 2 BASIC21.57■■□□□ 1.04
CPNE1Q99829 OR2I1P-207ENST00000453522 948 ntBASIC21.57■■□□□ 1.04
CPNE1Q99829 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CPNE1Q99829 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
CPNE1Q99829 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CPNE1Q99829 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
CPNE1Q99829 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CPNE1Q99829 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
CPNE1Q99829 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.56■■□□□ 1.04
CPNE1Q99829 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CPNE1Q99829 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CPNE1Q99829 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CPNE1Q99829 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC21.56■■□□□ 1.04
CPNE1Q99829 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CPNE1Q99829 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
CPNE1Q99829 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
CPNE1Q99829 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CPNE1Q99829 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.55■■□□□ 1.04
CPNE1Q99829 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.55■■□□□ 1.04
CPNE1Q99829 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CPNE1Q99829 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CPNE1Q99829 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
CPNE1Q99829 AC092171.4-201ENST00000609130 632 ntBASIC21.55■■□□□ 1.04
CPNE1Q99829 RASSF1-AS1-201ENST00000629828 790 ntBASIC21.55■■□□□ 1.04
CPNE1Q99829 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.55■■□□□ 1.04
CPNE1Q99829 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
CPNE1Q99829 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.55■■□□□ 1.04
CPNE1Q99829 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
CPNE1Q99829 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.55■■□□□ 1.04
CPNE1Q99829 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CPNE1Q99829 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CPNE1Q99829 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CPNE1Q99829 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CPNE1Q99829 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
CPNE1Q99829 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC21.54■■□□□ 1.04
CPNE1Q99829 SRD5A1P1-201ENST00000442297 786 ntBASIC21.54■■□□□ 1.04
CPNE1Q99829 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
CPNE1Q99829 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.54■■□□□ 1.04
CPNE1Q99829 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21.54■■□□□ 1.04
CPNE1Q99829 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms