Protein–RNA interactions for Protein: Q99731

CCL19, C-C motif chemokine 19, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL19Q99731 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCL19Q99731 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCL19Q99731 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCL19Q99731 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC18.35■□□□□ 0.53
CCL19Q99731 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCL19Q99731 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCL19Q99731 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CCL19Q99731 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCL19Q99731 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCL19Q99731 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCL19Q99731 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCL19Q99731 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCL19Q99731 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCL19Q99731 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.34■□□□□ 0.53
CCL19Q99731 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.34■□□□□ 0.53
CCL19Q99731 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC18.34■□□□□ 0.53
CCL19Q99731 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCL19Q99731 TFG-210ENST00000620299 1289 ntTSL 5 BASIC18.34■□□□□ 0.53
CCL19Q99731 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.34■□□□□ 0.53
CCL19Q99731 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCL19Q99731 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC18.34■□□□□ 0.53
CCL19Q99731 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CCL19Q99731 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC18.34■□□□□ 0.53
CCL19Q99731 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCL19Q99731 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCL19Q99731 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCL19Q99731 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CCL19Q99731 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC18.33■□□□□ 0.53
CCL19Q99731 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCL19Q99731 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC18.33■□□□□ 0.53
CCL19Q99731 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCL19Q99731 GUSBP6-202ENST00000438529 1198 ntBASIC18.33■□□□□ 0.52
CCL19Q99731 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
CCL19Q99731 AL138781.1-201ENST00000566567 1274 ntBASIC18.33■□□□□ 0.52
CCL19Q99731 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.33■□□□□ 0.52
CCL19Q99731 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC18.33■□□□□ 0.52
CCL19Q99731 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCL19Q99731 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCL19Q99731 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCL19Q99731 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC18.33■□□□□ 0.52
CCL19Q99731 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.52
CCL19Q99731 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC18.33■□□□□ 0.52
CCL19Q99731 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCL19Q99731 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCL19Q99731 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCL19Q99731 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCL19Q99731 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCL19Q99731 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC18.32■□□□□ 0.52
CCL19Q99731 FXN-202ENST00000396364 980 ntTSL 5 BASIC18.32■□□□□ 0.52
CCL19Q99731 AF201337.1-201ENST00000520239 748 ntBASIC18.32■□□□□ 0.52
CCL19Q99731 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CCL19Q99731 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCL19Q99731 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
CCL19Q99731 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCL19Q99731 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
CCL19Q99731 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC18.31■□□□□ 0.52
CCL19Q99731 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.31■□□□□ 0.52
CCL19Q99731 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC18.31■□□□□ 0.52
CCL19Q99731 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCL19Q99731 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCL19Q99731 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCL19Q99731 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCL19Q99731 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC18.31■□□□□ 0.52
CCL19Q99731 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC18.3■□□□□ 0.52
CCL19Q99731 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CCL19Q99731 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC18.3■□□□□ 0.52
CCL19Q99731 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CCL19Q99731 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
CCL19Q99731 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC18.3■□□□□ 0.52
CCL19Q99731 FAM201B-201ENST00000458407 597 ntBASIC18.3■□□□□ 0.52
CCL19Q99731 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCL19Q99731 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCL19Q99731 KLF13-207ENST00000560473 489 ntTSL 3 BASIC18.3■□□□□ 0.52
CCL19Q99731 AC105036.2-201ENST00000569468 176 ntBASIC18.3■□□□□ 0.52
CCL19Q99731 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
CCL19Q99731 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CCL19Q99731 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC18.3■□□□□ 0.52
CCL19Q99731 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
CCL19Q99731 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC18.29■□□□□ 0.52
CCL19Q99731 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCL19Q99731 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCL19Q99731 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC18.29■□□□□ 0.52
CCL19Q99731 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCL19Q99731 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCL19Q99731 AC069152.1-201ENST00000438030 544 ntBASIC18.29■□□□□ 0.52
CCL19Q99731 AC010141.2-201ENST00000452426 721 ntBASIC18.29■□□□□ 0.52
CCL19Q99731 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.29■□□□□ 0.52
CCL19Q99731 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC18.29■□□□□ 0.52
CCL19Q99731 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC18.29■□□□□ 0.52
CCL19Q99731 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.29■□□□□ 0.52
CCL19Q99731 AC133041.1-202ENST00000642053 222 ntBASIC18.29■□□□□ 0.52
CCL19Q99731 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCL19Q99731 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCL19Q99731 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC18.29■□□□□ 0.52
CCL19Q99731 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCL19Q99731 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCL19Q99731 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCL19Q99731 AC055733.4-201ENST00000638462 1354 ntBASIC18.29■□□□□ 0.52
CCL19Q99731 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCL19Q99731 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms