Protein–RNA interactions for Protein: Q99643

SDHC, Succinate dehydrogenase cytochrome b560 subunit, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHCQ99643 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SDHCQ99643 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SDHCQ99643 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SDHCQ99643 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SDHCQ99643 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SDHCQ99643 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SDHCQ99643 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SDHCQ99643 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SDHCQ99643 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SDHCQ99643 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SDHCQ99643 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
SDHCQ99643 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
SDHCQ99643 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SDHCQ99643 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SDHCQ99643 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SDHCQ99643 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SDHCQ99643 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
SDHCQ99643 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SDHCQ99643 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SDHCQ99643 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.7■□□□□ 0.58
SDHCQ99643 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.7■□□□□ 0.58
SDHCQ99643 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SDHCQ99643 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
SDHCQ99643 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SDHCQ99643 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SDHCQ99643 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.69■□□□□ 0.58
SDHCQ99643 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.69■□□□□ 0.58
SDHCQ99643 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SDHCQ99643 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC18.69■□□□□ 0.58
SDHCQ99643 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SDHCQ99643 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SDHCQ99643 AGPS-202ENST00000409888 815 ntTSL 4 BASIC18.69■□□□□ 0.58
SDHCQ99643 GFER-205ENST00000569451 517 ntTSL 5 BASIC18.69■□□□□ 0.58
SDHCQ99643 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.69■□□□□ 0.58
SDHCQ99643 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SDHCQ99643 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SDHCQ99643 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SDHCQ99643 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC18.69■□□□□ 0.58
SDHCQ99643 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SDHCQ99643 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SDHCQ99643 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SDHCQ99643 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC18.68■□□□□ 0.58
SDHCQ99643 RPS2P7-201ENST00000447334 885 ntBASIC18.68■□□□□ 0.58
SDHCQ99643 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SDHCQ99643 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SDHCQ99643 AC073314.1-201ENST00000568729 2216 ntBASIC18.68■□□□□ 0.58
SDHCQ99643 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SDHCQ99643 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SDHCQ99643 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC18.67■□□□□ 0.58
SDHCQ99643 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SDHCQ99643 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
SDHCQ99643 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SDHCQ99643 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
SDHCQ99643 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.67■□□□□ 0.58
SDHCQ99643 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SDHCQ99643 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.67■□□□□ 0.58
SDHCQ99643 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.67■□□□□ 0.58
SDHCQ99643 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC18.67■□□□□ 0.58
SDHCQ99643 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC18.67■□□□□ 0.58
SDHCQ99643 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC18.67■□□□□ 0.58
SDHCQ99643 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SDHCQ99643 AC007029.1-201ENST00000604183 313 ntBASIC18.67■□□□□ 0.58
SDHCQ99643 CA15P2-201ENST00000611168 834 ntBASIC18.67■□□□□ 0.58
SDHCQ99643 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SDHCQ99643 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SDHCQ99643 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.67■□□□□ 0.58
SDHCQ99643 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
SDHCQ99643 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SDHCQ99643 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.67■□□□□ 0.58
SDHCQ99643 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
SDHCQ99643 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SDHCQ99643 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SDHCQ99643 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
SDHCQ99643 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SDHCQ99643 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SDHCQ99643 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SDHCQ99643 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SDHCQ99643 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SDHCQ99643 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
SDHCQ99643 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC18.66■□□□□ 0.58
SDHCQ99643 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
SDHCQ99643 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SDHCQ99643 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SDHCQ99643 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SDHCQ99643 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SDHCQ99643 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SDHCQ99643 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SDHCQ99643 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.65■□□□□ 0.58
SDHCQ99643 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.65■□□□□ 0.58
SDHCQ99643 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SDHCQ99643 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SDHCQ99643 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.65■□□□□ 0.58
SDHCQ99643 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SDHCQ99643 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
SDHCQ99643 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
SDHCQ99643 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.65■□□□□ 0.58
SDHCQ99643 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.65■□□□□ 0.58
SDHCQ99643 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
SDHCQ99643 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SDHCQ99643 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 12.2 ms