Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NR1H4Q96RI1 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.32■□□□□ 0.84
NR1H4Q96RI1 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC20.32■□□□□ 0.84
NR1H4Q96RI1 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
NR1H4Q96RI1 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NR1H4Q96RI1 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
NR1H4Q96RI1 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NR1H4Q96RI1 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
NR1H4Q96RI1 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NR1H4Q96RI1 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NR1H4Q96RI1 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NR1H4Q96RI1 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
NR1H4Q96RI1 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NR1H4Q96RI1 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
NR1H4Q96RI1 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NR1H4Q96RI1 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NR1H4Q96RI1 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
NR1H4Q96RI1 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
NR1H4Q96RI1 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NR1H4Q96RI1 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NR1H4Q96RI1 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
NR1H4Q96RI1 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.31■□□□□ 0.84
NR1H4Q96RI1 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
NR1H4Q96RI1 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NR1H4Q96RI1 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
NR1H4Q96RI1 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NR1H4Q96RI1 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.31■□□□□ 0.84
NR1H4Q96RI1 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NR1H4Q96RI1 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
NR1H4Q96RI1 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NR1H4Q96RI1 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.31■□□□□ 0.84
NR1H4Q96RI1 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
NR1H4Q96RI1 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NR1H4Q96RI1 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NR1H4Q96RI1 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.31■□□□□ 0.84
NR1H4Q96RI1 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
NR1H4Q96RI1 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NR1H4Q96RI1 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NR1H4Q96RI1 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
NR1H4Q96RI1 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NR1H4Q96RI1 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NR1H4Q96RI1 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NR1H4Q96RI1 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NR1H4Q96RI1 RPS2-202ENST00000526522 924 ntTSL 2 BASIC20.3■□□□□ 0.84
NR1H4Q96RI1 AC060814.1-201ENST00000554326 538 ntBASIC20.3■□□□□ 0.84
NR1H4Q96RI1 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC20.3■□□□□ 0.84
NR1H4Q96RI1 MOB2-207ENST00000614710 705 ntTSL 5 BASIC20.3■□□□□ 0.84
NR1H4Q96RI1 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NR1H4Q96RI1 AC138932.1-201ENST00000534164 6830 ntBASIC20.3■□□□□ 0.84
NR1H4Q96RI1 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
NR1H4Q96RI1 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NR1H4Q96RI1 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NR1H4Q96RI1 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NR1H4Q96RI1 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NR1H4Q96RI1 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.29■□□□□ 0.84
NR1H4Q96RI1 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NR1H4Q96RI1 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.29■□□□□ 0.84
NR1H4Q96RI1 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
NR1H4Q96RI1 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC20.29■□□□□ 0.84
NR1H4Q96RI1 AL157400.5-201ENST00000507624 621 ntBASIC20.29■□□□□ 0.84
NR1H4Q96RI1 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NR1H4Q96RI1 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NR1H4Q96RI1 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NR1H4Q96RI1 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
NR1H4Q96RI1 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NR1H4Q96RI1 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NR1H4Q96RI1 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NR1H4Q96RI1 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NR1H4Q96RI1 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.28■□□□□ 0.84
NR1H4Q96RI1 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.28■□□□□ 0.84
NR1H4Q96RI1 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NR1H4Q96RI1 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
NR1H4Q96RI1 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
NR1H4Q96RI1 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
NR1H4Q96RI1 AC090877.2-201ENST00000558441 1738 ntBASIC20.28■□□□□ 0.84
NR1H4Q96RI1 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NR1H4Q96RI1 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.28■□□□□ 0.84
NR1H4Q96RI1 MIR3960-201ENST00000583311 91 ntBASIC20.28■□□□□ 0.84
NR1H4Q96RI1 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.28■□□□□ 0.84
NR1H4Q96RI1 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NR1H4Q96RI1 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NR1H4Q96RI1 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NR1H4Q96RI1 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.28■□□□□ 0.84
NR1H4Q96RI1 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
NR1H4Q96RI1 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
NR1H4Q96RI1 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NR1H4Q96RI1 AC087289.5-201ENST00000586076 3175 ntBASIC20.28■□□□□ 0.84
NR1H4Q96RI1 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
NR1H4Q96RI1 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NR1H4Q96RI1 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NR1H4Q96RI1 MIR639-201ENST00000384974 98 ntBASIC20.27■□□□□ 0.84
NR1H4Q96RI1 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NR1H4Q96RI1 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
NR1H4Q96RI1 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NR1H4Q96RI1 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NR1H4Q96RI1 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
NR1H4Q96RI1 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NR1H4Q96RI1 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
NR1H4Q96RI1 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
NR1H4Q96RI1 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms