Protein–RNA interactions for Protein: Q96QP1

ALPK1, Alpha-protein kinase 1, humanhuman

Predictions only

Length 1,244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK1Q96QP1 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.22■□□□□ 0.83
ALPK1Q96QP1 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.22■□□□□ 0.83
ALPK1Q96QP1 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
ALPK1Q96QP1 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
ALPK1Q96QP1 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ALPK1Q96QP1 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ALPK1Q96QP1 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
ALPK1Q96QP1 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.21■□□□□ 0.83
ALPK1Q96QP1 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
ALPK1Q96QP1 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ALPK1Q96QP1 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.21■□□□□ 0.83
ALPK1Q96QP1 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.21■□□□□ 0.83
ALPK1Q96QP1 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ALPK1Q96QP1 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
ALPK1Q96QP1 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
ALPK1Q96QP1 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
ALPK1Q96QP1 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.21■□□□□ 0.83
ALPK1Q96QP1 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ALPK1Q96QP1 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ALPK1Q96QP1 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ALPK1Q96QP1 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ALPK1Q96QP1 ZNRF2P3-201ENST00000424200 374 ntBASIC20.2■□□□□ 0.82
ALPK1Q96QP1 AL512631.2-201ENST00000604634 923 ntBASIC20.2■□□□□ 0.82
ALPK1Q96QP1 AC106739.1-201ENST00000617035 715 ntBASIC20.2■□□□□ 0.82
ALPK1Q96QP1 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.2■□□□□ 0.82
ALPK1Q96QP1 AC005703.6-201ENST00000623265 1329 ntBASIC20.2■□□□□ 0.82
ALPK1Q96QP1 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
ALPK1Q96QP1 LINC01960-201ENST00000563759 1884 ntBASIC20.2■□□□□ 0.82
ALPK1Q96QP1 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.2■□□□□ 0.82
ALPK1Q96QP1 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
ALPK1Q96QP1 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ALPK1Q96QP1 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ALPK1Q96QP1 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ALPK1Q96QP1 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.19■□□□□ 0.82
ALPK1Q96QP1 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.19■□□□□ 0.82
ALPK1Q96QP1 AC104564.3-201ENST00000582367 638 ntBASIC20.19■□□□□ 0.82
ALPK1Q96QP1 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.19■□□□□ 0.82
ALPK1Q96QP1 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
ALPK1Q96QP1 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ALPK1Q96QP1 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ALPK1Q96QP1 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
ALPK1Q96QP1 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
ALPK1Q96QP1 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.19■□□□□ 0.82
ALPK1Q96QP1 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
ALPK1Q96QP1 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ALPK1Q96QP1 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.19■□□□□ 0.82
ALPK1Q96QP1 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.18■□□□□ 0.82
ALPK1Q96QP1 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ALPK1Q96QP1 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.18■□□□□ 0.82
ALPK1Q96QP1 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ALPK1Q96QP1 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.18■□□□□ 0.82
ALPK1Q96QP1 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ALPK1Q96QP1 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
ALPK1Q96QP1 AC142381.2-201ENST00000566120 298 ntBASIC20.18■□□□□ 0.82
ALPK1Q96QP1 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ALPK1Q96QP1 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ALPK1Q96QP1 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ALPK1Q96QP1 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ALPK1Q96QP1 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
ALPK1Q96QP1 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ALPK1Q96QP1 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.18■□□□□ 0.82
ALPK1Q96QP1 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ALPK1Q96QP1 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
ALPK1Q96QP1 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.18■□□□□ 0.82
ALPK1Q96QP1 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.17■□□□□ 0.82
ALPK1Q96QP1 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ALPK1Q96QP1 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.17■□□□□ 0.82
ALPK1Q96QP1 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
ALPK1Q96QP1 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
ALPK1Q96QP1 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
ALPK1Q96QP1 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.17■□□□□ 0.82
ALPK1Q96QP1 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.17■□□□□ 0.82
ALPK1Q96QP1 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ALPK1Q96QP1 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ALPK1Q96QP1 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ALPK1Q96QP1 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
ALPK1Q96QP1 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.17■□□□□ 0.82
ALPK1Q96QP1 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20.17■□□□□ 0.82
ALPK1Q96QP1 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.17■□□□□ 0.82
ALPK1Q96QP1 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ALPK1Q96QP1 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ALPK1Q96QP1 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.17■□□□□ 0.82
ALPK1Q96QP1 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ALPK1Q96QP1 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
ALPK1Q96QP1 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
ALPK1Q96QP1 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
ALPK1Q96QP1 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
ALPK1Q96QP1 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ALPK1Q96QP1 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ALPK1Q96QP1 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
ALPK1Q96QP1 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.16■□□□□ 0.82
ALPK1Q96QP1 MIR5787-201ENST00000611784 55 ntBASIC20.16■□□□□ 0.82
ALPK1Q96QP1 MIR6722-201ENST00000617286 78 ntBASIC20.16■□□□□ 0.82
ALPK1Q96QP1 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ALPK1Q96QP1 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ALPK1Q96QP1 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.16■□□□□ 0.82
ALPK1Q96QP1 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
ALPK1Q96QP1 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ALPK1Q96QP1 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
ALPK1Q96QP1 AC026271.2-201ENST00000428091 497 ntBASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms