Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC18.56■□□□□ 0.56
CSMD1Q96PZ7 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.56■□□□□ 0.56
CSMD1Q96PZ7 AC142381.4-202ENST00000563973 229 ntBASIC18.56■□□□□ 0.56
CSMD1Q96PZ7 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC18.56■□□□□ 0.56
CSMD1Q96PZ7 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CSMD1Q96PZ7 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CSMD1Q96PZ7 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CSMD1Q96PZ7 AC026366.1-201ENST00000488803 879 ntBASIC18.56■□□□□ 0.56
CSMD1Q96PZ7 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CSMD1Q96PZ7 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CSMD1Q96PZ7 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CSMD1Q96PZ7 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC18.56■□□□□ 0.56
CSMD1Q96PZ7 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC18.56■□□□□ 0.56
CSMD1Q96PZ7 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.55■□□□□ 0.56
CSMD1Q96PZ7 EI24-211ENST00000534546 1544 ntTSL 2 BASIC18.55■□□□□ 0.56
CSMD1Q96PZ7 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CSMD1Q96PZ7 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CSMD1Q96PZ7 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CSMD1Q96PZ7 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.55■□□□□ 0.56
CSMD1Q96PZ7 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CSMD1Q96PZ7 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CSMD1Q96PZ7 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
CSMD1Q96PZ7 AC145676.1-201ENST00000514988 2004 ntBASIC18.54■□□□□ 0.56
CSMD1Q96PZ7 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
CSMD1Q96PZ7 KRT18P21-201ENST00000515767 1272 ntBASIC18.54■□□□□ 0.56
CSMD1Q96PZ7 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CSMD1Q96PZ7 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.54■□□□□ 0.56
CSMD1Q96PZ7 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CSMD1Q96PZ7 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC18.54■□□□□ 0.56
CSMD1Q96PZ7 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CSMD1Q96PZ7 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CSMD1Q96PZ7 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CSMD1Q96PZ7 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CSMD1Q96PZ7 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.54■□□□□ 0.56
CSMD1Q96PZ7 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC18.54■□□□□ 0.56
CSMD1Q96PZ7 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CSMD1Q96PZ7 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CSMD1Q96PZ7 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CSMD1Q96PZ7 RPS20-210ENST00000523936 899 ntTSL 2 BASIC18.53■□□□□ 0.56
CSMD1Q96PZ7 UNC93B5-201ENST00000530315 699 ntBASIC18.53■□□□□ 0.56
CSMD1Q96PZ7 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC18.53■□□□□ 0.56
CSMD1Q96PZ7 MYCNOS-205ENST00000641950 531 ntBASIC18.53■□□□□ 0.56
CSMD1Q96PZ7 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CSMD1Q96PZ7 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC18.53■□□□□ 0.56
CSMD1Q96PZ7 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC18.53■□□□□ 0.56
CSMD1Q96PZ7 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.53■□□□□ 0.56
CSMD1Q96PZ7 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CSMD1Q96PZ7 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CSMD1Q96PZ7 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CSMD1Q96PZ7 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC18.53■□□□□ 0.56
CSMD1Q96PZ7 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CSMD1Q96PZ7 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CSMD1Q96PZ7 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CSMD1Q96PZ7 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC18.53■□□□□ 0.56
CSMD1Q96PZ7 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.53■□□□□ 0.56
CSMD1Q96PZ7 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CSMD1Q96PZ7 PXK-203ENST00000383715 1756 ntTSL 5 BASIC18.52■□□□□ 0.56
CSMD1Q96PZ7 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CSMD1Q96PZ7 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CSMD1Q96PZ7 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CSMD1Q96PZ7 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
CSMD1Q96PZ7 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CSMD1Q96PZ7 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
CSMD1Q96PZ7 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
CSMD1Q96PZ7 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CSMD1Q96PZ7 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.52■□□□□ 0.56
CSMD1Q96PZ7 LSR-205ENST00000427250 1606 ntTSL 2 BASIC18.52■□□□□ 0.56
CSMD1Q96PZ7 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC18.52■□□□□ 0.56
CSMD1Q96PZ7 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.55
CSMD1Q96PZ7 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.55
CSMD1Q96PZ7 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CSMD1Q96PZ7 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
CSMD1Q96PZ7 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CSMD1Q96PZ7 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
CSMD1Q96PZ7 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC18.51■□□□□ 0.55
CSMD1Q96PZ7 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC18.51■□□□□ 0.55
CSMD1Q96PZ7 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC18.51■□□□□ 0.55
CSMD1Q96PZ7 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
CSMD1Q96PZ7 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18.51■□□□□ 0.55
CSMD1Q96PZ7 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CSMD1Q96PZ7 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC18.51■□□□□ 0.55
CSMD1Q96PZ7 BX088651.1-201ENST00000540551 451 ntBASIC18.51■□□□□ 0.55
CSMD1Q96PZ7 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CSMD1Q96PZ7 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CSMD1Q96PZ7 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CSMD1Q96PZ7 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18.5■□□□□ 0.55
CSMD1Q96PZ7 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
CSMD1Q96PZ7 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC18.5■□□□□ 0.55
CSMD1Q96PZ7 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CSMD1Q96PZ7 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CSMD1Q96PZ7 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CSMD1Q96PZ7 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CSMD1Q96PZ7 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.5■□□□□ 0.55
CSMD1Q96PZ7 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CSMD1Q96PZ7 GAS7-202ENST00000396115 929 ntTSL 5 BASIC18.5■□□□□ 0.55
CSMD1Q96PZ7 AC093787.1-201ENST00000450396 207 ntBASIC18.5■□□□□ 0.55
CSMD1Q96PZ7 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC18.5■□□□□ 0.55
CSMD1Q96PZ7 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC18.5■□□□□ 0.55
CSMD1Q96PZ7 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CSMD1Q96PZ7 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms