Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
GAFA1Q96PS6 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC18.01■□□□□ 0.47
GAFA1Q96PS6 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC18.01■□□□□ 0.47
GAFA1Q96PS6 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC18.01■□□□□ 0.47
GAFA1Q96PS6 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC18.01■□□□□ 0.47
GAFA1Q96PS6 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
GAFA1Q96PS6 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
GAFA1Q96PS6 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
GAFA1Q96PS6 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
GAFA1Q96PS6 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
GAFA1Q96PS6 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
GAFA1Q96PS6 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
GAFA1Q96PS6 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC18.01■□□□□ 0.47
GAFA1Q96PS6 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
GAFA1Q96PS6 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
GAFA1Q96PS6 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC18■□□□□ 0.47
GAFA1Q96PS6 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC18■□□□□ 0.47
GAFA1Q96PS6 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC18■□□□□ 0.47
GAFA1Q96PS6 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC18■□□□□ 0.47
GAFA1Q96PS6 ZNRF2P3-201ENST00000424200 374 ntBASIC18■□□□□ 0.47
GAFA1Q96PS6 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC18■□□□□ 0.47
GAFA1Q96PS6 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC18■□□□□ 0.47
GAFA1Q96PS6 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC18■□□□□ 0.47
GAFA1Q96PS6 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC18■□□□□ 0.47
GAFA1Q96PS6 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC18■□□□□ 0.47
GAFA1Q96PS6 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
GAFA1Q96PS6 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
GAFA1Q96PS6 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC18■□□□□ 0.47
GAFA1Q96PS6 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC18■□□□□ 0.47
GAFA1Q96PS6 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
GAFA1Q96PS6 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC18■□□□□ 0.47
GAFA1Q96PS6 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
GAFA1Q96PS6 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
GAFA1Q96PS6 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC17.99■□□□□ 0.47
GAFA1Q96PS6 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
GAFA1Q96PS6 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
GAFA1Q96PS6 AC012414.1-201ENST00000556676 535 ntBASIC17.99■□□□□ 0.47
GAFA1Q96PS6 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC17.99■□□□□ 0.47
GAFA1Q96PS6 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
GAFA1Q96PS6 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
GAFA1Q96PS6 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
GAFA1Q96PS6 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
GAFA1Q96PS6 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
GAFA1Q96PS6 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC17.99■□□□□ 0.47
GAFA1Q96PS6 EP400NL-214ENST00000641289 2402 ntBASIC17.99■□□□□ 0.47
GAFA1Q96PS6 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
GAFA1Q96PS6 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
GAFA1Q96PS6 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
GAFA1Q96PS6 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
GAFA1Q96PS6 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
GAFA1Q96PS6 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC17.98■□□□□ 0.47
GAFA1Q96PS6 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC17.98■□□□□ 0.47
GAFA1Q96PS6 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC17.98■□□□□ 0.47
GAFA1Q96PS6 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC17.98■□□□□ 0.47
GAFA1Q96PS6 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC17.98■□□□□ 0.47
GAFA1Q96PS6 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC17.98■□□□□ 0.47
GAFA1Q96PS6 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
GAFA1Q96PS6 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC17.98■□□□□ 0.47
GAFA1Q96PS6 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
GAFA1Q96PS6 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
GAFA1Q96PS6 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC17.98■□□□□ 0.47
GAFA1Q96PS6 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
GAFA1Q96PS6 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC17.98■□□□□ 0.47
GAFA1Q96PS6 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
GAFA1Q96PS6 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC17.97■□□□□ 0.47
GAFA1Q96PS6 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC17.97■□□□□ 0.47
GAFA1Q96PS6 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
GAFA1Q96PS6 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
GAFA1Q96PS6 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
GAFA1Q96PS6 GUK1-205ENST00000366722 850 ntTSL 3 BASIC17.97■□□□□ 0.47
GAFA1Q96PS6 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
GAFA1Q96PS6 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
GAFA1Q96PS6 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
GAFA1Q96PS6 MFF-208ENST00000409616 1247 ntTSL 5 BASIC17.97■□□□□ 0.47
GAFA1Q96PS6 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC17.97■□□□□ 0.47
GAFA1Q96PS6 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC17.97■□□□□ 0.47
GAFA1Q96PS6 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
GAFA1Q96PS6 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
GAFA1Q96PS6 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
GAFA1Q96PS6 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
GAFA1Q96PS6 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
GAFA1Q96PS6 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
GAFA1Q96PS6 AP004607.7-201ENST00000527152 1677 ntBASIC17.96■□□□□ 0.47
GAFA1Q96PS6 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC17.96■□□□□ 0.47
GAFA1Q96PS6 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
GAFA1Q96PS6 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
GAFA1Q96PS6 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
GAFA1Q96PS6 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
GAFA1Q96PS6 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC17.96■□□□□ 0.47
GAFA1Q96PS6 AL354811.1-201ENST00000610286 706 ntBASIC17.96■□□□□ 0.47
GAFA1Q96PS6 AL358852.1-201ENST00000623174 1268 ntBASIC17.96■□□□□ 0.47
GAFA1Q96PS6 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
GAFA1Q96PS6 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
GAFA1Q96PS6 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
GAFA1Q96PS6 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
GAFA1Q96PS6 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
GAFA1Q96PS6 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC17.95■□□□□ 0.46
GAFA1Q96PS6 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC17.95■□□□□ 0.46
GAFA1Q96PS6 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
GAFA1Q96PS6 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms