Protein–RNA interactions for Protein: Q96NZ1

FOXN4, Forkhead box protein N4, humanhuman

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4Q96NZ1 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
FOXN4Q96NZ1 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
FOXN4Q96NZ1 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
FOXN4Q96NZ1 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
FOXN4Q96NZ1 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
FOXN4Q96NZ1 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
FOXN4Q96NZ1 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
FOXN4Q96NZ1 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.32■□□□□ 0.68
FOXN4Q96NZ1 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
FOXN4Q96NZ1 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
FOXN4Q96NZ1 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.32■□□□□ 0.68
FOXN4Q96NZ1 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.32■□□□□ 0.68
FOXN4Q96NZ1 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
FOXN4Q96NZ1 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.32■□□□□ 0.68
FOXN4Q96NZ1 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
FOXN4Q96NZ1 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
FOXN4Q96NZ1 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.32■□□□□ 0.68
FOXN4Q96NZ1 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
FOXN4Q96NZ1 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
FOXN4Q96NZ1 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
FOXN4Q96NZ1 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
FOXN4Q96NZ1 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
FOXN4Q96NZ1 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
FOXN4Q96NZ1 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
FOXN4Q96NZ1 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
FOXN4Q96NZ1 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
FOXN4Q96NZ1 AL136162.1-201ENST00000607711 1078 ntBASIC19.31■□□□□ 0.68
FOXN4Q96NZ1 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
FOXN4Q96NZ1 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
FOXN4Q96NZ1 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.31■□□□□ 0.68
FOXN4Q96NZ1 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.31■□□□□ 0.68
FOXN4Q96NZ1 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.3■□□□□ 0.68
FOXN4Q96NZ1 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
FOXN4Q96NZ1 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC19.3■□□□□ 0.68
FOXN4Q96NZ1 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
FOXN4Q96NZ1 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
FOXN4Q96NZ1 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
FOXN4Q96NZ1 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC19.3■□□□□ 0.68
FOXN4Q96NZ1 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
FOXN4Q96NZ1 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
FOXN4Q96NZ1 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
FOXN4Q96NZ1 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.3■□□□□ 0.68
FOXN4Q96NZ1 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.3■□□□□ 0.68
FOXN4Q96NZ1 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.3■□□□□ 0.68
FOXN4Q96NZ1 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
FOXN4Q96NZ1 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.3■□□□□ 0.68
FOXN4Q96NZ1 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
FOXN4Q96NZ1 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
FOXN4Q96NZ1 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
FOXN4Q96NZ1 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
FOXN4Q96NZ1 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
FOXN4Q96NZ1 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
FOXN4Q96NZ1 PTCHD3P2-201ENST00000424937 1205 ntBASIC19.29■□□□□ 0.68
FOXN4Q96NZ1 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.29■□□□□ 0.68
FOXN4Q96NZ1 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
FOXN4Q96NZ1 AC142381.2-201ENST00000566120 298 ntBASIC19.29■□□□□ 0.68
FOXN4Q96NZ1 AC010525.1-201ENST00000585559 441 ntBASIC19.29■□□□□ 0.68
FOXN4Q96NZ1 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
FOXN4Q96NZ1 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC19.29■□□□□ 0.68
FOXN4Q96NZ1 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
FOXN4Q96NZ1 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.29■□□□□ 0.68
FOXN4Q96NZ1 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
FOXN4Q96NZ1 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
FOXN4Q96NZ1 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.29■□□□□ 0.68
FOXN4Q96NZ1 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
FOXN4Q96NZ1 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
FOXN4Q96NZ1 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
FOXN4Q96NZ1 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.28■□□□□ 0.68
FOXN4Q96NZ1 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
FOXN4Q96NZ1 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.28■□□□□ 0.68
FOXN4Q96NZ1 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
FOXN4Q96NZ1 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
FOXN4Q96NZ1 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
FOXN4Q96NZ1 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC19.28■□□□□ 0.68
FOXN4Q96NZ1 CA15P2-201ENST00000611168 834 ntBASIC19.28■□□□□ 0.68
FOXN4Q96NZ1 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
FOXN4Q96NZ1 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
FOXN4Q96NZ1 AL137060.1-201ENST00000618151 2648 ntBASIC19.28■□□□□ 0.68
FOXN4Q96NZ1 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
FOXN4Q96NZ1 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
FOXN4Q96NZ1 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.28■□□□□ 0.68
FOXN4Q96NZ1 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
FOXN4Q96NZ1 AC135279.3-201ENST00000610945 1311 ntBASIC19.27■□□□□ 0.68
FOXN4Q96NZ1 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
FOXN4Q96NZ1 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.27■□□□□ 0.68
FOXN4Q96NZ1 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
FOXN4Q96NZ1 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
FOXN4Q96NZ1 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.27■□□□□ 0.68
FOXN4Q96NZ1 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
FOXN4Q96NZ1 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
FOXN4Q96NZ1 EBPL-204ENST00000378272 766 ntTSL 3 BASIC19.27■□□□□ 0.68
FOXN4Q96NZ1 SERBP1P1-201ENST00000396021 1160 ntBASIC19.27■□□□□ 0.68
FOXN4Q96NZ1 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.27■□□□□ 0.68
FOXN4Q96NZ1 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
FOXN4Q96NZ1 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19.27■□□□□ 0.68
FOXN4Q96NZ1 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.27■□□□□ 0.68
FOXN4Q96NZ1 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.27■□□□□ 0.67
FOXN4Q96NZ1 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.27■□□□□ 0.67
FOXN4Q96NZ1 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
FOXN4Q96NZ1 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms