Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PDLIM5Q96HC4 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.19■□□□□ 0.98
PDLIM5Q96HC4 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PDLIM5Q96HC4 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
PDLIM5Q96HC4 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC21.18■□□□□ 0.98
PDLIM5Q96HC4 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PDLIM5Q96HC4 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PDLIM5Q96HC4 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
PDLIM5Q96HC4 AC024257.2-201ENST00000549699 147 ntBASIC21.18■□□□□ 0.98
PDLIM5Q96HC4 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PDLIM5Q96HC4 MIR4767-201ENST00000582827 78 ntBASIC21.18■□□□□ 0.98
PDLIM5Q96HC4 AL136162.1-201ENST00000607711 1078 ntBASIC21.18■□□□□ 0.98
PDLIM5Q96HC4 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PDLIM5Q96HC4 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
PDLIM5Q96HC4 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.18■□□□□ 0.98
PDLIM5Q96HC4 AC008406.3-201ENST00000620001 1374 ntBASIC21.18■□□□□ 0.98
PDLIM5Q96HC4 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PDLIM5Q96HC4 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.18■□□□□ 0.98
PDLIM5Q96HC4 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PDLIM5Q96HC4 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PDLIM5Q96HC4 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
PDLIM5Q96HC4 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PDLIM5Q96HC4 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.17■□□□□ 0.98
PDLIM5Q96HC4 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
PDLIM5Q96HC4 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PDLIM5Q96HC4 PEMT-206ENST00000435340 960 ntTSL 5 BASIC21.17■□□□□ 0.98
PDLIM5Q96HC4 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
PDLIM5Q96HC4 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC21.17■□□□□ 0.98
PDLIM5Q96HC4 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
PDLIM5Q96HC4 FBXW4P1-201ENST00000426721 2239 ntBASIC21.17■□□□□ 0.98
PDLIM5Q96HC4 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PDLIM5Q96HC4 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PDLIM5Q96HC4 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
PDLIM5Q96HC4 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PDLIM5Q96HC4 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.16■□□□□ 0.98
PDLIM5Q96HC4 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PDLIM5Q96HC4 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
PDLIM5Q96HC4 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
PDLIM5Q96HC4 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PDLIM5Q96HC4 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC21.16■□□□□ 0.98
PDLIM5Q96HC4 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PDLIM5Q96HC4 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC21.16■□□□□ 0.98
PDLIM5Q96HC4 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PDLIM5Q96HC4 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC21.16■□□□□ 0.98
PDLIM5Q96HC4 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC21.16■□□□□ 0.98
PDLIM5Q96HC4 AC133561.4-201ENST00000566112 224 ntBASIC21.16■□□□□ 0.98
PDLIM5Q96HC4 AC233992.3-201ENST00000607491 485 ntBASIC21.16■□□□□ 0.98
PDLIM5Q96HC4 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
PDLIM5Q96HC4 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PDLIM5Q96HC4 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PDLIM5Q96HC4 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
PDLIM5Q96HC4 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PDLIM5Q96HC4 AC135279.3-201ENST00000610945 1311 ntBASIC21.15■□□□□ 0.98
PDLIM5Q96HC4 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PDLIM5Q96HC4 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PDLIM5Q96HC4 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PDLIM5Q96HC4 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC21.14■□□□□ 0.98
PDLIM5Q96HC4 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21.14■□□□□ 0.98
PDLIM5Q96HC4 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
PDLIM5Q96HC4 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC21.14■□□□□ 0.97
PDLIM5Q96HC4 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC21.14■□□□□ 0.97
PDLIM5Q96HC4 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PDLIM5Q96HC4 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PDLIM5Q96HC4 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
PDLIM5Q96HC4 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
PDLIM5Q96HC4 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PDLIM5Q96HC4 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PDLIM5Q96HC4 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC21.13■□□□□ 0.97
PDLIM5Q96HC4 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
PDLIM5Q96HC4 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PDLIM5Q96HC4 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
PDLIM5Q96HC4 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PDLIM5Q96HC4 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PDLIM5Q96HC4 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.13■□□□□ 0.97
PDLIM5Q96HC4 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PDLIM5Q96HC4 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
PDLIM5Q96HC4 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC21.12■□□□□ 0.97
PDLIM5Q96HC4 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PDLIM5Q96HC4 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
PDLIM5Q96HC4 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PDLIM5Q96HC4 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PDLIM5Q96HC4 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC21.12■□□□□ 0.97
PDLIM5Q96HC4 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
PDLIM5Q96HC4 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC21.12■□□□□ 0.97
PDLIM5Q96HC4 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC21.12■□□□□ 0.97
PDLIM5Q96HC4 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC21.12■□□□□ 0.97
PDLIM5Q96HC4 AL034346.1-201ENST00000568244 1277 ntBASIC21.12■□□□□ 0.97
PDLIM5Q96HC4 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PDLIM5Q96HC4 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC21.12■□□□□ 0.97
PDLIM5Q96HC4 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PDLIM5Q96HC4 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
PDLIM5Q96HC4 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PDLIM5Q96HC4 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PDLIM5Q96HC4 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PDLIM5Q96HC4 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
PDLIM5Q96HC4 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
PDLIM5Q96HC4 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC21.11■□□□□ 0.97
PDLIM5Q96HC4 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC21.11■□□□□ 0.97
PDLIM5Q96HC4 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC21.11■□□□□ 0.97
PDLIM5Q96HC4 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms