Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC19.55■□□□□ 0.72
HPS1Q92902 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HPS1Q92902 AC005229.4-201ENST00000610085 2198 ntBASIC19.54■□□□□ 0.72
HPS1Q92902 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.54■□□□□ 0.72
HPS1Q92902 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.54■□□□□ 0.72
HPS1Q92902 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HPS1Q92902 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
HPS1Q92902 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
HPS1Q92902 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
HPS1Q92902 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC19.54■□□□□ 0.72
HPS1Q92902 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
HPS1Q92902 SENP5-202ENST00000419026 973 ntTSL 3 BASIC19.54■□□□□ 0.72
HPS1Q92902 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC19.54■□□□□ 0.72
HPS1Q92902 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HPS1Q92902 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
HPS1Q92902 AL117332.1-201ENST00000622628 974 ntBASIC19.54■□□□□ 0.72
HPS1Q92902 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
HPS1Q92902 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
HPS1Q92902 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
HPS1Q92902 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
HPS1Q92902 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HPS1Q92902 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
HPS1Q92902 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
HPS1Q92902 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.54■□□□□ 0.72
HPS1Q92902 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
HPS1Q92902 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
HPS1Q92902 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HPS1Q92902 AL157384.1-201ENST00000445995 2473 ntBASIC19.53■□□□□ 0.72
HPS1Q92902 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HPS1Q92902 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HPS1Q92902 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HPS1Q92902 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
HPS1Q92902 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HPS1Q92902 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.53■□□□□ 0.72
HPS1Q92902 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HPS1Q92902 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
HPS1Q92902 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC19.53■□□□□ 0.72
HPS1Q92902 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HPS1Q92902 STK32C-205ENST00000456004 607 ntTSL 2 BASIC19.53■□□□□ 0.72
HPS1Q92902 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
HPS1Q92902 AC131281.2-201ENST00000520478 145 ntBASIC19.53■□□□□ 0.72
HPS1Q92902 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
HPS1Q92902 TRIR-202ENST00000588213 841 ntTSL 3 BASIC19.53■□□□□ 0.72
HPS1Q92902 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HPS1Q92902 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HPS1Q92902 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.53■□□□□ 0.72
HPS1Q92902 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
HPS1Q92902 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.53■□□□□ 0.72
HPS1Q92902 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC19.53■□□□□ 0.72
HPS1Q92902 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
HPS1Q92902 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
HPS1Q92902 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC19.52■□□□□ 0.72
HPS1Q92902 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
HPS1Q92902 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
HPS1Q92902 LBH-205ENST00000407930 756 ntTSL 2 BASIC19.52■□□□□ 0.72
HPS1Q92902 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC19.52■□□□□ 0.72
HPS1Q92902 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC19.52■□□□□ 0.72
HPS1Q92902 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC19.52■□□□□ 0.72
HPS1Q92902 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.52■□□□□ 0.72
HPS1Q92902 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
HPS1Q92902 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
HPS1Q92902 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC19.52■□□□□ 0.71
HPS1Q92902 AF131216.4-201ENST00000638924 1588 ntBASIC19.52■□□□□ 0.71
HPS1Q92902 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
HPS1Q92902 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.52■□□□□ 0.71
HPS1Q92902 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.52■□□□□ 0.71
HPS1Q92902 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
HPS1Q92902 AL161729.1-201ENST00000604104 1402 ntBASIC19.51■□□□□ 0.71
HPS1Q92902 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HPS1Q92902 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HPS1Q92902 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC19.51■□□□□ 0.71
HPS1Q92902 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
HPS1Q92902 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
HPS1Q92902 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HPS1Q92902 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HPS1Q92902 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
HPS1Q92902 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.51■□□□□ 0.71
HPS1Q92902 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.51■□□□□ 0.71
HPS1Q92902 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
HPS1Q92902 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
HPS1Q92902 AC092053.2-201ENST00000640557 1818 ntBASIC19.51■□□□□ 0.71
HPS1Q92902 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
HPS1Q92902 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HPS1Q92902 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HPS1Q92902 LSM4-201ENST00000252816 986 ntTSL 2 BASIC19.5■□□□□ 0.71
HPS1Q92902 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HPS1Q92902 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.5■□□□□ 0.71
HPS1Q92902 AL139246.5-201ENST00000606645 996 ntBASIC19.5■□□□□ 0.71
HPS1Q92902 RALB-208ENST00000631312 311 ntTSL 5 BASIC19.5■□□□□ 0.71
HPS1Q92902 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
HPS1Q92902 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
HPS1Q92902 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
HPS1Q92902 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
HPS1Q92902 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
HPS1Q92902 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
HPS1Q92902 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC19.5■□□□□ 0.71
HPS1Q92902 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HPS1Q92902 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HPS1Q92902 LINC01521-201ENST00000504184 1943 ntBASIC19.49■□□□□ 0.71
HPS1Q92902 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms