Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
SYNE2Q8WXH0 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC8.99□□□□□ -0.97
SYNE2Q8WXH0 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC8.99□□□□□ -0.97
SYNE2Q8WXH0 MMP23A-201ENST00000234610 1017 ntBASIC8.99□□□□□ -0.97
SYNE2Q8WXH0 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
SYNE2Q8WXH0 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
SYNE2Q8WXH0 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC8.99□□□□□ -0.97
SYNE2Q8WXH0 AP003071.4-201ENST00000562276 1284 ntBASIC8.99□□□□□ -0.97
SYNE2Q8WXH0 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC8.99□□□□□ -0.97
SYNE2Q8WXH0 Six3os1_6.1-201ENST00000620790 196 ntBASIC8.99□□□□□ -0.97
SYNE2Q8WXH0 MYCNOS-205ENST00000641950 531 ntBASIC8.99□□□□□ -0.97
SYNE2Q8WXH0 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC8.99□□□□□ -0.97
SYNE2Q8WXH0 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
SYNE2Q8WXH0 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
SYNE2Q8WXH0 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC8.99□□□□□ -0.97
SYNE2Q8WXH0 PP7080-204ENST00000510714 601 ntTSL 3 BASIC8.99□□□□□ -0.97
SYNE2Q8WXH0 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
SYNE2Q8WXH0 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC8.99□□□□□ -0.97
SYNE2Q8WXH0 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC8.99□□□□□ -0.97
SYNE2Q8WXH0 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
SYNE2Q8WXH0 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC8.99□□□□□ -0.97
SYNE2Q8WXH0 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
SYNE2Q8WXH0 FDX1P1-201ENST00000449115 551 ntBASIC8.99□□□□□ -0.97
SYNE2Q8WXH0 CFL1-212ENST00000531413 636 ntTSL 3 BASIC8.99□□□□□ -0.97
SYNE2Q8WXH0 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
SYNE2Q8WXH0 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
SYNE2Q8WXH0 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
SYNE2Q8WXH0 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC8.99□□□□□ -0.97
SYNE2Q8WXH0 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
SYNE2Q8WXH0 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC8.99□□□□□ -0.97
SYNE2Q8WXH0 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC8.99□□□□□ -0.97
SYNE2Q8WXH0 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC8.99□□□□□ -0.97
SYNE2Q8WXH0 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC8.99□□□□□ -0.97
SYNE2Q8WXH0 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC8.99□□□□□ -0.97
SYNE2Q8WXH0 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC8.99□□□□□ -0.97
SYNE2Q8WXH0 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
SYNE2Q8WXH0 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC8.99□□□□□ -0.97
SYNE2Q8WXH0 AC010536.3-201ENST00000620306 533 ntBASIC8.99□□□□□ -0.97
SYNE2Q8WXH0 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
SYNE2Q8WXH0 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
SYNE2Q8WXH0 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
SYNE2Q8WXH0 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC8.99□□□□□ -0.97
SYNE2Q8WXH0 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
SYNE2Q8WXH0 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC8.99□□□□□ -0.97
SYNE2Q8WXH0 HLA-J-202ENST00000469281 1241 ntBASIC8.99□□□□□ -0.97
SYNE2Q8WXH0 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
SYNE2Q8WXH0 DUX4L26-201ENST00000489078 1255 ntBASIC8.98□□□□□ -0.97
SYNE2Q8WXH0 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC8.98□□□□□ -0.97
SYNE2Q8WXH0 RN7SL471P-201ENST00000580476 299 ntBASIC8.98□□□□□ -0.97
SYNE2Q8WXH0 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC8.98□□□□□ -0.97
SYNE2Q8WXH0 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC8.98□□□□□ -0.97
SYNE2Q8WXH0 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC8.98□□□□□ -0.97
SYNE2Q8WXH0 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC8.98□□□□□ -0.97
SYNE2Q8WXH0 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
SYNE2Q8WXH0 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC8.98□□□□□ -0.97
SYNE2Q8WXH0 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
SYNE2Q8WXH0 AC005521.1-201ENST00000393351 872 ntBASIC8.98□□□□□ -0.97
SYNE2Q8WXH0 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC8.98□□□□□ -0.97
SYNE2Q8WXH0 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
SYNE2Q8WXH0 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
SYNE2Q8WXH0 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC8.98□□□□□ -0.97
SYNE2Q8WXH0 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
SYNE2Q8WXH0 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
SYNE2Q8WXH0 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC8.98□□□□□ -0.97
SYNE2Q8WXH0 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
SYNE2Q8WXH0 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
SYNE2Q8WXH0 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC8.97□□□□□ -0.97
SYNE2Q8WXH0 TERF1P1-201ENST00000311003 1181 ntBASIC8.97□□□□□ -0.97
SYNE2Q8WXH0 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
SYNE2Q8WXH0 HMGN1P19-201ENST00000436976 333 ntBASIC8.97□□□□□ -0.97
SYNE2Q8WXH0 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC8.97□□□□□ -0.97
SYNE2Q8WXH0 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC8.97□□□□□ -0.97
SYNE2Q8WXH0 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
SYNE2Q8WXH0 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
SYNE2Q8WXH0 AL512625.2-201ENST00000417533 625 ntBASIC8.97□□□□□ -0.97
SYNE2Q8WXH0 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC8.97□□□□□ -0.97
SYNE2Q8WXH0 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC8.97□□□□□ -0.97
SYNE2Q8WXH0 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC8.97□□□□□ -0.97
SYNE2Q8WXH0 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
SYNE2Q8WXH0 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC8.97□□□□□ -0.97
SYNE2Q8WXH0 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC8.97□□□□□ -0.97
SYNE2Q8WXH0 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC8.97□□□□□ -0.97
SYNE2Q8WXH0 AC013268.1-206ENST00000638368 961 ntBASIC8.97□□□□□ -0.97
SYNE2Q8WXH0 AC112229.1-201ENST00000639295 961 ntBASIC8.97□□□□□ -0.97
SYNE2Q8WXH0 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
SYNE2Q8WXH0 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
SYNE2Q8WXH0 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC8.97□□□□□ -0.97
SYNE2Q8WXH0 AC073508.3-201ENST00000619697 1419 ntBASIC8.97□□□□□ -0.97
SYNE2Q8WXH0 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC8.97□□□□□ -0.97
SYNE2Q8WXH0 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC8.97□□□□□ -0.97
SYNE2Q8WXH0 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
SYNE2Q8WXH0 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
SYNE2Q8WXH0 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
SYNE2Q8WXH0 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
SYNE2Q8WXH0 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
SYNE2Q8WXH0 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
SYNE2Q8WXH0 DECR2-212ENST00000627716 352 ntTSL 2 BASIC8.96□□□□□ -0.97
SYNE2Q8WXH0 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
SYNE2Q8WXH0 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
SYNE2Q8WXH0 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC8.96□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms