Protein–RNA interactions for Protein: Q8WVM8

SCFD1, Sec1 family domain-containing protein 1, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1Q8WVM8 AL355001.2-201ENST00000620617 1191 ntBASIC23.84■■□□□ 1.41
SCFD1Q8WVM8 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SCFD1Q8WVM8 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SCFD1Q8WVM8 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
SCFD1Q8WVM8 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC23.83■■□□□ 1.41
SCFD1Q8WVM8 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC23.83■■□□□ 1.41
SCFD1Q8WVM8 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC23.83■■□□□ 1.41
SCFD1Q8WVM8 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
SCFD1Q8WVM8 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC23.83■■□□□ 1.41
SCFD1Q8WVM8 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
SCFD1Q8WVM8 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
SCFD1Q8WVM8 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
SCFD1Q8WVM8 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
SCFD1Q8WVM8 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
SCFD1Q8WVM8 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SCFD1Q8WVM8 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SCFD1Q8WVM8 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC23.82■■□□□ 1.4
SCFD1Q8WVM8 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC23.82■■□□□ 1.4
SCFD1Q8WVM8 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
SCFD1Q8WVM8 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC23.82■■□□□ 1.4
SCFD1Q8WVM8 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC23.82■■□□□ 1.4
SCFD1Q8WVM8 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SCFD1Q8WVM8 MIR939-201ENST00000401314 82 ntBASIC23.82■■□□□ 1.4
SCFD1Q8WVM8 AC126544.1-201ENST00000580842 1059 ntBASIC23.82■■□□□ 1.4
SCFD1Q8WVM8 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC23.82■■□□□ 1.4
SCFD1Q8WVM8 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
SCFD1Q8WVM8 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SCFD1Q8WVM8 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SCFD1Q8WVM8 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
SCFD1Q8WVM8 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
SCFD1Q8WVM8 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SCFD1Q8WVM8 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC23.81■■□□□ 1.4
SCFD1Q8WVM8 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SCFD1Q8WVM8 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
SCFD1Q8WVM8 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SCFD1Q8WVM8 AC027682.1-201ENST00000562846 899 ntBASIC23.81■■□□□ 1.4
SCFD1Q8WVM8 AF213884.3-201ENST00000563833 479 ntBASIC23.81■■□□□ 1.4
SCFD1Q8WVM8 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SCFD1Q8WVM8 AL136967.2-201ENST00000623968 743 ntBASIC23.81■■□□□ 1.4
SCFD1Q8WVM8 MPST-208ENST00000628507 698 ntTSL 5 BASIC23.81■■□□□ 1.4
SCFD1Q8WVM8 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC23.81■■□□□ 1.4
SCFD1Q8WVM8 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
SCFD1Q8WVM8 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC23.81■■□□□ 1.4
SCFD1Q8WVM8 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SCFD1Q8WVM8 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
SCFD1Q8WVM8 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SCFD1Q8WVM8 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
SCFD1Q8WVM8 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SCFD1Q8WVM8 FAM99A-202ENST00000538190 1989 ntBASIC23.8■■□□□ 1.4
SCFD1Q8WVM8 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SCFD1Q8WVM8 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SCFD1Q8WVM8 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SCFD1Q8WVM8 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC23.8■■□□□ 1.4
SCFD1Q8WVM8 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SCFD1Q8WVM8 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC23.8■■□□□ 1.4
SCFD1Q8WVM8 SUDS3P1-201ENST00000505831 966 ntBASIC23.8■■□□□ 1.4
SCFD1Q8WVM8 IGHV3-19-201ENST00000521488 291 ntBASIC23.8■■□□□ 1.4
SCFD1Q8WVM8 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SCFD1Q8WVM8 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
SCFD1Q8WVM8 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC23.8■■□□□ 1.4
SCFD1Q8WVM8 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SCFD1Q8WVM8 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SCFD1Q8WVM8 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
SCFD1Q8WVM8 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SCFD1Q8WVM8 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
SCFD1Q8WVM8 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SCFD1Q8WVM8 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC23.79■■□□□ 1.4
SCFD1Q8WVM8 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SCFD1Q8WVM8 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC23.79■■□□□ 1.4
SCFD1Q8WVM8 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SCFD1Q8WVM8 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SCFD1Q8WVM8 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SCFD1Q8WVM8 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
SCFD1Q8WVM8 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SCFD1Q8WVM8 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SCFD1Q8WVM8 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SCFD1Q8WVM8 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SCFD1Q8WVM8 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SCFD1Q8WVM8 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC23.78■■□□□ 1.4
SCFD1Q8WVM8 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC23.78■■□□□ 1.4
SCFD1Q8WVM8 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SCFD1Q8WVM8 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SCFD1Q8WVM8 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SCFD1Q8WVM8 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SCFD1Q8WVM8 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SCFD1Q8WVM8 WWC2-AS2-201ENST00000578387 2183 ntBASIC23.78■■□□□ 1.4
SCFD1Q8WVM8 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SCFD1Q8WVM8 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SCFD1Q8WVM8 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC23.77■■□□□ 1.4
SCFD1Q8WVM8 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
SCFD1Q8WVM8 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC23.77■■□□□ 1.4
SCFD1Q8WVM8 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
SCFD1Q8WVM8 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SCFD1Q8WVM8 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
SCFD1Q8WVM8 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC23.77■■□□□ 1.4
SCFD1Q8WVM8 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SCFD1Q8WVM8 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC23.77■■□□□ 1.4
SCFD1Q8WVM8 RASA4CP-201ENST00000424092 1398 ntBASIC23.77■■□□□ 1.4
SCFD1Q8WVM8 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.39
SCFD1Q8WVM8 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms