Protein–RNA interactions for Protein: Q8NDW4

ZNF248, Zinc finger protein 248, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248Q8NDW4 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.65■□□□□ 0.9
ZNF248Q8NDW4 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
ZNF248Q8NDW4 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
ZNF248Q8NDW4 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
ZNF248Q8NDW4 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ZNF248Q8NDW4 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ZNF248Q8NDW4 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ZNF248Q8NDW4 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
ZNF248Q8NDW4 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.64■□□□□ 0.89
ZNF248Q8NDW4 SLC7A5P2-201ENST00000553010 536 ntBASIC20.64■□□□□ 0.89
ZNF248Q8NDW4 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.64■□□□□ 0.89
ZNF248Q8NDW4 AC005181.1-201ENST00000604782 1256 ntBASIC20.64■□□□□ 0.89
ZNF248Q8NDW4 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
ZNF248Q8NDW4 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZNF248Q8NDW4 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ZNF248Q8NDW4 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ZNF248Q8NDW4 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.63■□□□□ 0.89
ZNF248Q8NDW4 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZNF248Q8NDW4 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.63■□□□□ 0.89
ZNF248Q8NDW4 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.63■□□□□ 0.89
ZNF248Q8NDW4 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.63■□□□□ 0.89
ZNF248Q8NDW4 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZNF248Q8NDW4 ABCB10P4-201ENST00000566803 2184 ntBASIC20.63■□□□□ 0.89
ZNF248Q8NDW4 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
ZNF248Q8NDW4 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZNF248Q8NDW4 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
ZNF248Q8NDW4 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ZNF248Q8NDW4 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ZNF248Q8NDW4 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
ZNF248Q8NDW4 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ZNF248Q8NDW4 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ZNF248Q8NDW4 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC20.62■□□□□ 0.89
ZNF248Q8NDW4 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ZNF248Q8NDW4 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ZNF248Q8NDW4 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
ZNF248Q8NDW4 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
ZNF248Q8NDW4 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.62■□□□□ 0.89
ZNF248Q8NDW4 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ZNF248Q8NDW4 GUSBP6-202ENST00000438529 1198 ntBASIC20.62■□□□□ 0.89
ZNF248Q8NDW4 AC010141.3-201ENST00000456659 717 ntBASIC20.62■□□□□ 0.89
ZNF248Q8NDW4 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ZNF248Q8NDW4 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.62■□□□□ 0.89
ZNF248Q8NDW4 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
ZNF248Q8NDW4 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.62■□□□□ 0.89
ZNF248Q8NDW4 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
ZNF248Q8NDW4 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ZNF248Q8NDW4 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
ZNF248Q8NDW4 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.61■□□□□ 0.89
ZNF248Q8NDW4 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
ZNF248Q8NDW4 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
ZNF248Q8NDW4 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ZNF248Q8NDW4 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ZNF248Q8NDW4 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ZNF248Q8NDW4 AC093827.2-201ENST00000512654 315 ntBASIC20.61■□□□□ 0.89
ZNF248Q8NDW4 AL138781.1-201ENST00000566567 1274 ntBASIC20.61■□□□□ 0.89
ZNF248Q8NDW4 MIR4651-201ENST00000582622 73 ntBASIC20.61■□□□□ 0.89
ZNF248Q8NDW4 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ZNF248Q8NDW4 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.61■□□□□ 0.89
ZNF248Q8NDW4 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ZNF248Q8NDW4 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
ZNF248Q8NDW4 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.6■□□□□ 0.89
ZNF248Q8NDW4 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ZNF248Q8NDW4 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
ZNF248Q8NDW4 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
ZNF248Q8NDW4 AC133041.1-202ENST00000642053 222 ntBASIC20.6■□□□□ 0.89
ZNF248Q8NDW4 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ZNF248Q8NDW4 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
ZNF248Q8NDW4 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ZNF248Q8NDW4 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.59■□□□□ 0.89
ZNF248Q8NDW4 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ZNF248Q8NDW4 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ZNF248Q8NDW4 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ZNF248Q8NDW4 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
ZNF248Q8NDW4 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ZNF248Q8NDW4 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
ZNF248Q8NDW4 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ZNF248Q8NDW4 AC069152.1-201ENST00000438030 544 ntBASIC20.59■□□□□ 0.89
ZNF248Q8NDW4 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
ZNF248Q8NDW4 DUX4L16-201ENST00000555130 1264 ntBASIC20.59■□□□□ 0.89
ZNF248Q8NDW4 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC20.59■□□□□ 0.89
ZNF248Q8NDW4 DET1-205ENST00000558413 583 ntTSL 4 BASIC20.59■□□□□ 0.89
ZNF248Q8NDW4 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.59■□□□□ 0.89
ZNF248Q8NDW4 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.59■□□□□ 0.89
ZNF248Q8NDW4 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ZNF248Q8NDW4 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ZNF248Q8NDW4 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ZNF248Q8NDW4 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
ZNF248Q8NDW4 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ZNF248Q8NDW4 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ZNF248Q8NDW4 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
ZNF248Q8NDW4 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ZNF248Q8NDW4 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ZNF248Q8NDW4 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ZNF248Q8NDW4 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
ZNF248Q8NDW4 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.58■□□□□ 0.89
ZNF248Q8NDW4 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.58■□□□□ 0.89
ZNF248Q8NDW4 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.58■□□□□ 0.89
ZNF248Q8NDW4 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
ZNF248Q8NDW4 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ZNF248Q8NDW4 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.58■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms