Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC21.41■■□□□ 1.02
TRAM1L1Q8N609 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.41■■□□□ 1.02
TRAM1L1Q8N609 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TRAM1L1Q8N609 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC21.4■■□□□ 1.02
TRAM1L1Q8N609 AP004607.7-201ENST00000527152 1677 ntBASIC21.4■■□□□ 1.02
TRAM1L1Q8N609 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC21.4■■□□□ 1.02
TRAM1L1Q8N609 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TRAM1L1Q8N609 MIR935-201ENST00000401179 91 ntBASIC21.4■■□□□ 1.02
TRAM1L1Q8N609 RARRES2P6-201ENST00000567333 442 ntBASIC21.4■■□□□ 1.02
TRAM1L1Q8N609 TPRG1LP1-201ENST00000598702 760 ntBASIC21.4■■□□□ 1.02
TRAM1L1Q8N609 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
TRAM1L1Q8N609 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
TRAM1L1Q8N609 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC21.4■■□□□ 1.02
TRAM1L1Q8N609 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
TRAM1L1Q8N609 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
TRAM1L1Q8N609 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TRAM1L1Q8N609 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
TRAM1L1Q8N609 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.39■■□□□ 1.02
TRAM1L1Q8N609 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
TRAM1L1Q8N609 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
TRAM1L1Q8N609 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
TRAM1L1Q8N609 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
TRAM1L1Q8N609 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
TRAM1L1Q8N609 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TRAM1L1Q8N609 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC21.39■■□□□ 1.01
TRAM1L1Q8N609 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
TRAM1L1Q8N609 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TRAM1L1Q8N609 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TRAM1L1Q8N609 AC097381.1-201ENST00000429019 1296 ntBASIC21.39■■□□□ 1.01
TRAM1L1Q8N609 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
TRAM1L1Q8N609 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC21.39■■□□□ 1.01
TRAM1L1Q8N609 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
TRAM1L1Q8N609 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC21.39■■□□□ 1.01
TRAM1L1Q8N609 MIR6821-201ENST00000617625 74 ntBASIC21.39■■□□□ 1.01
TRAM1L1Q8N609 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TRAM1L1Q8N609 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
TRAM1L1Q8N609 AC133561.1-201ENST00000568600 2415 ntBASIC21.39■■□□□ 1.01
TRAM1L1Q8N609 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
TRAM1L1Q8N609 AC009237.3-201ENST00000393279 1427 ntBASIC21.38■■□□□ 1.01
TRAM1L1Q8N609 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.38■■□□□ 1.01
TRAM1L1Q8N609 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRAM1L1Q8N609 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
TRAM1L1Q8N609 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TRAM1L1Q8N609 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
TRAM1L1Q8N609 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRAM1L1Q8N609 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRAM1L1Q8N609 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRAM1L1Q8N609 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
TRAM1L1Q8N609 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
TRAM1L1Q8N609 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRAM1L1Q8N609 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TRAM1L1Q8N609 AC026271.2-201ENST00000428091 497 ntBASIC21.38■■□□□ 1.01
TRAM1L1Q8N609 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC21.38■■□□□ 1.01
TRAM1L1Q8N609 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC21.38■■□□□ 1.01
TRAM1L1Q8N609 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
TRAM1L1Q8N609 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRAM1L1Q8N609 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TRAM1L1Q8N609 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRAM1L1Q8N609 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
TRAM1L1Q8N609 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRAM1L1Q8N609 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21.38■■□□□ 1.01
TRAM1L1Q8N609 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRAM1L1Q8N609 LINC02228-203ENST00000641970 1355 ntBASIC21.37■■□□□ 1.01
TRAM1L1Q8N609 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
TRAM1L1Q8N609 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
TRAM1L1Q8N609 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TRAM1L1Q8N609 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TRAM1L1Q8N609 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TRAM1L1Q8N609 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC21.37■■□□□ 1.01
TRAM1L1Q8N609 RAB43-208ENST00000615093 783 ntTSL 5 BASIC21.37■■□□□ 1.01
TRAM1L1Q8N609 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TRAM1L1Q8N609 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TRAM1L1Q8N609 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
TRAM1L1Q8N609 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.37■■□□□ 1.01
TRAM1L1Q8N609 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
TRAM1L1Q8N609 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC21.37■■□□□ 1.01
TRAM1L1Q8N609 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC21.37■■□□□ 1.01
TRAM1L1Q8N609 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.37■■□□□ 1.01
TRAM1L1Q8N609 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
TRAM1L1Q8N609 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TRAM1L1Q8N609 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TRAM1L1Q8N609 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRAM1L1Q8N609 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC21.36■■□□□ 1.01
TRAM1L1Q8N609 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRAM1L1Q8N609 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRAM1L1Q8N609 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TRAM1L1Q8N609 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TRAM1L1Q8N609 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TRAM1L1Q8N609 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC21.36■■□□□ 1.01
TRAM1L1Q8N609 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC21.36■■□□□ 1.01
TRAM1L1Q8N609 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC21.36■■□□□ 1.01
TRAM1L1Q8N609 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TRAM1L1Q8N609 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRAM1L1Q8N609 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRAM1L1Q8N609 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRAM1L1Q8N609 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
TRAM1L1Q8N609 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
TRAM1L1Q8N609 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRAM1L1Q8N609 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC21.35■■□□□ 1.01
TRAM1L1Q8N609 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms