Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC22.04■■□□□ 1.12
CHPFQ8IZ52 BID-214ENST00000617586 542 ntTSL 5 BASIC22.04■■□□□ 1.12
CHPFQ8IZ52 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
CHPFQ8IZ52 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CHPFQ8IZ52 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
CHPFQ8IZ52 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CHPFQ8IZ52 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC22.03■■□□□ 1.12
CHPFQ8IZ52 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
CHPFQ8IZ52 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CHPFQ8IZ52 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC22.03■■□□□ 1.12
CHPFQ8IZ52 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CHPFQ8IZ52 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC22.03■■□□□ 1.12
CHPFQ8IZ52 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC22.03■■□□□ 1.12
CHPFQ8IZ52 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CHPFQ8IZ52 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC22.03■■□□□ 1.12
CHPFQ8IZ52 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CHPFQ8IZ52 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC22.03■■□□□ 1.12
CHPFQ8IZ52 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC22.03■■□□□ 1.12
CHPFQ8IZ52 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC22.03■■□□□ 1.12
CHPFQ8IZ52 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC22.03■■□□□ 1.12
CHPFQ8IZ52 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
CHPFQ8IZ52 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CHPFQ8IZ52 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
CHPFQ8IZ52 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CHPFQ8IZ52 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC22.02■■□□□ 1.12
CHPFQ8IZ52 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CHPFQ8IZ52 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CHPFQ8IZ52 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC22.02■■□□□ 1.12
CHPFQ8IZ52 AC073111.5-205ENST00000641717 521 ntBASIC22.02■■□□□ 1.12
CHPFQ8IZ52 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CHPFQ8IZ52 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
CHPFQ8IZ52 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CHPFQ8IZ52 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC22.02■■□□□ 1.11
CHPFQ8IZ52 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
CHPFQ8IZ52 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
CHPFQ8IZ52 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CHPFQ8IZ52 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CHPFQ8IZ52 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
CHPFQ8IZ52 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CHPFQ8IZ52 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CHPFQ8IZ52 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CHPFQ8IZ52 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC22.01■■□□□ 1.11
CHPFQ8IZ52 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
CHPFQ8IZ52 TK2-208ENST00000545043 1120 ntTSL 2 BASIC22.01■■□□□ 1.11
CHPFQ8IZ52 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CHPFQ8IZ52 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC22■■□□□ 1.11
CHPFQ8IZ52 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CHPFQ8IZ52 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
CHPFQ8IZ52 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC22■■□□□ 1.11
CHPFQ8IZ52 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
CHPFQ8IZ52 HLA-L-209ENST00000420110 1011 ntBASIC22■■□□□ 1.11
CHPFQ8IZ52 CDCA4P2-201ENST00000441182 718 ntBASIC22■■□□□ 1.11
CHPFQ8IZ52 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC22■■□□□ 1.11
CHPFQ8IZ52 WWOX-218ENST00000627394 894 ntTSL 5 BASIC22■■□□□ 1.11
CHPFQ8IZ52 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC22■■□□□ 1.11
CHPFQ8IZ52 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC22■■□□□ 1.11
CHPFQ8IZ52 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC22■■□□□ 1.11
CHPFQ8IZ52 AC005224.4-201ENST00000583262 1652 ntBASIC22■■□□□ 1.11
CHPFQ8IZ52 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CHPFQ8IZ52 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21.99■■□□□ 1.11
CHPFQ8IZ52 AC009237.3-201ENST00000393279 1427 ntBASIC21.99■■□□□ 1.11
CHPFQ8IZ52 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CHPFQ8IZ52 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CHPFQ8IZ52 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
CHPFQ8IZ52 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CHPFQ8IZ52 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CHPFQ8IZ52 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CHPFQ8IZ52 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CHPFQ8IZ52 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC21.99■■□□□ 1.11
CHPFQ8IZ52 ESRRAP2-201ENST00000418437 1549 ntBASIC21.99■■□□□ 1.11
CHPFQ8IZ52 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.99■■□□□ 1.11
CHPFQ8IZ52 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
CHPFQ8IZ52 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
CHPFQ8IZ52 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
CHPFQ8IZ52 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC21.98■■□□□ 1.11
CHPFQ8IZ52 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC21.98■■□□□ 1.11
CHPFQ8IZ52 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CHPFQ8IZ52 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
CHPFQ8IZ52 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
CHPFQ8IZ52 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CHPFQ8IZ52 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CHPFQ8IZ52 LINC01960-201ENST00000563759 1884 ntBASIC21.98■■□□□ 1.11
CHPFQ8IZ52 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CHPFQ8IZ52 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.97■■□□□ 1.11
CHPFQ8IZ52 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
CHPFQ8IZ52 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CHPFQ8IZ52 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
CHPFQ8IZ52 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CHPFQ8IZ52 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
CHPFQ8IZ52 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CHPFQ8IZ52 KRT18P11-201ENST00000435214 1283 ntBASIC21.97■■□□□ 1.11
CHPFQ8IZ52 AC026185.1-201ENST00000445748 174 ntBASIC21.97■■□□□ 1.11
CHPFQ8IZ52 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC21.97■■□□□ 1.11
CHPFQ8IZ52 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
CHPFQ8IZ52 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC21.97■■□□□ 1.11
CHPFQ8IZ52 RAP2CP1-201ENST00000605103 478 ntBASIC21.97■■□□□ 1.11
CHPFQ8IZ52 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
CHPFQ8IZ52 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.97■■□□□ 1.11
CHPFQ8IZ52 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.97■■□□□ 1.11
CHPFQ8IZ52 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms