Protein–RNA interactions for Protein: Q8IYT3

CCDC170, Coiled-coil domain-containing protein 170, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170Q8IYT3 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CCDC170Q8IYT3 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC23.19■■□□□ 1.3
CCDC170Q8IYT3 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CCDC170Q8IYT3 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CCDC170Q8IYT3 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC23.19■■□□□ 1.3
CCDC170Q8IYT3 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC23.19■■□□□ 1.3
CCDC170Q8IYT3 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CCDC170Q8IYT3 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CCDC170Q8IYT3 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
CCDC170Q8IYT3 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC23.19■■□□□ 1.3
CCDC170Q8IYT3 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CCDC170Q8IYT3 MIR4787-201ENST00000607364 84 ntBASIC23.19■■□□□ 1.3
CCDC170Q8IYT3 AC010997.5-201ENST00000609182 354 ntBASIC23.19■■□□□ 1.3
CCDC170Q8IYT3 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CCDC170Q8IYT3 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CCDC170Q8IYT3 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CCDC170Q8IYT3 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CCDC170Q8IYT3 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC23.18■■□□□ 1.3
CCDC170Q8IYT3 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CCDC170Q8IYT3 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC23.18■■□□□ 1.3
CCDC170Q8IYT3 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
CCDC170Q8IYT3 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC23.18■■□□□ 1.3
CCDC170Q8IYT3 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CCDC170Q8IYT3 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC23.18■■□□□ 1.3
CCDC170Q8IYT3 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CCDC170Q8IYT3 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
CCDC170Q8IYT3 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CCDC170Q8IYT3 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CCDC170Q8IYT3 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CCDC170Q8IYT3 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CCDC170Q8IYT3 MED17-221ENST00000639724 2317 ntTSL 5 BASIC23.17■■□□□ 1.3
CCDC170Q8IYT3 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CCDC170Q8IYT3 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CCDC170Q8IYT3 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC23.17■■□□□ 1.3
CCDC170Q8IYT3 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC23.17■■□□□ 1.3
CCDC170Q8IYT3 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
CCDC170Q8IYT3 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CCDC170Q8IYT3 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CCDC170Q8IYT3 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CCDC170Q8IYT3 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CCDC170Q8IYT3 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC23.16■■□□□ 1.3
CCDC170Q8IYT3 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC23.16■■□□□ 1.3
CCDC170Q8IYT3 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
CCDC170Q8IYT3 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CCDC170Q8IYT3 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
CCDC170Q8IYT3 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CCDC170Q8IYT3 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
CCDC170Q8IYT3 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC23.16■■□□□ 1.3
CCDC170Q8IYT3 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
CCDC170Q8IYT3 USP45-205ENST00000472914 1617 ntTSL 5 BASIC23.15■■□□□ 1.3
CCDC170Q8IYT3 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC23.15■■□□□ 1.3
CCDC170Q8IYT3 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CCDC170Q8IYT3 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CCDC170Q8IYT3 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC23.15■■□□□ 1.3
CCDC170Q8IYT3 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CCDC170Q8IYT3 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC23.15■■□□□ 1.3
CCDC170Q8IYT3 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC23.15■■□□□ 1.3
CCDC170Q8IYT3 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CCDC170Q8IYT3 GTSE1-AS1-202ENST00000623117 1518 ntBASIC23.15■■□□□ 1.3
CCDC170Q8IYT3 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC23.15■■□□□ 1.3
CCDC170Q8IYT3 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
CCDC170Q8IYT3 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC23.15■■□□□ 1.3
CCDC170Q8IYT3 AC241377.3-202ENST00000626088 1088 ntBASIC23.15■■□□□ 1.3
CCDC170Q8IYT3 AC241585.3-202ENST00000628937 1088 ntBASIC23.15■■□□□ 1.3
CCDC170Q8IYT3 AC245100.8-202ENST00000629247 1058 ntBASIC23.15■■□□□ 1.3
CCDC170Q8IYT3 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC23.15■■□□□ 1.3
CCDC170Q8IYT3 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CCDC170Q8IYT3 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC23.15■■□□□ 1.3
CCDC170Q8IYT3 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
CCDC170Q8IYT3 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CCDC170Q8IYT3 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
CCDC170Q8IYT3 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.3
CCDC170Q8IYT3 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CCDC170Q8IYT3 LSM4-201ENST00000252816 986 ntTSL 2 BASIC23.14■■□□□ 1.29
CCDC170Q8IYT3 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC23.14■■□□□ 1.29
CCDC170Q8IYT3 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC23.14■■□□□ 1.29
CCDC170Q8IYT3 EI24-211ENST00000534546 1544 ntTSL 2 BASIC23.13■■□□□ 1.29
CCDC170Q8IYT3 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
CCDC170Q8IYT3 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CCDC170Q8IYT3 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CCDC170Q8IYT3 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CCDC170Q8IYT3 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
CCDC170Q8IYT3 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC23.13■■□□□ 1.29
CCDC170Q8IYT3 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
CCDC170Q8IYT3 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CCDC170Q8IYT3 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CCDC170Q8IYT3 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC23.12■■□□□ 1.29
CCDC170Q8IYT3 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CCDC170Q8IYT3 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CCDC170Q8IYT3 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC23.12■■□□□ 1.29
CCDC170Q8IYT3 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
CCDC170Q8IYT3 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
CCDC170Q8IYT3 AC104564.3-201ENST00000582367 638 ntBASIC23.12■■□□□ 1.29
CCDC170Q8IYT3 AL117332.1-201ENST00000622628 974 ntBASIC23.12■■□□□ 1.29
CCDC170Q8IYT3 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CCDC170Q8IYT3 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CCDC170Q8IYT3 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC23.12■■□□□ 1.29
CCDC170Q8IYT3 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CCDC170Q8IYT3 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CCDC170Q8IYT3 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC23.12■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms