Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
C9orf40Q8IXQ3 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20■□□□□ 0.79
C9orf40Q8IXQ3 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20■□□□□ 0.79
C9orf40Q8IXQ3 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
C9orf40Q8IXQ3 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
C9orf40Q8IXQ3 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC20■□□□□ 0.79
C9orf40Q8IXQ3 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20■□□□□ 0.79
C9orf40Q8IXQ3 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
C9orf40Q8IXQ3 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20■□□□□ 0.79
C9orf40Q8IXQ3 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20■□□□□ 0.79
C9orf40Q8IXQ3 TPRG1LP1-201ENST00000598702 760 ntBASIC20■□□□□ 0.79
C9orf40Q8IXQ3 GUSBP5-202ENST00000510805 1989 ntBASIC20■□□□□ 0.79
C9orf40Q8IXQ3 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
C9orf40Q8IXQ3 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
C9orf40Q8IXQ3 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
C9orf40Q8IXQ3 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20■□□□□ 0.79
C9orf40Q8IXQ3 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20■□□□□ 0.79
C9orf40Q8IXQ3 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
C9orf40Q8IXQ3 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
C9orf40Q8IXQ3 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.99■□□□□ 0.79
C9orf40Q8IXQ3 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
C9orf40Q8IXQ3 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC19.99■□□□□ 0.79
C9orf40Q8IXQ3 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
C9orf40Q8IXQ3 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
C9orf40Q8IXQ3 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
C9orf40Q8IXQ3 AC123595.1-201ENST00000440769 1046 ntBASIC19.99■□□□□ 0.79
C9orf40Q8IXQ3 AC087623.3-201ENST00000607047 1098 ntBASIC19.99■□□□□ 0.79
C9orf40Q8IXQ3 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
C9orf40Q8IXQ3 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
C9orf40Q8IXQ3 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
C9orf40Q8IXQ3 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
C9orf40Q8IXQ3 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
C9orf40Q8IXQ3 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
C9orf40Q8IXQ3 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
C9orf40Q8IXQ3 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.99■□□□□ 0.79
C9orf40Q8IXQ3 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.99■□□□□ 0.79
C9orf40Q8IXQ3 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
C9orf40Q8IXQ3 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
C9orf40Q8IXQ3 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
C9orf40Q8IXQ3 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
C9orf40Q8IXQ3 AP004607.7-201ENST00000527152 1677 ntBASIC19.98■□□□□ 0.79
C9orf40Q8IXQ3 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
C9orf40Q8IXQ3 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
C9orf40Q8IXQ3 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
C9orf40Q8IXQ3 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
C9orf40Q8IXQ3 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.98■□□□□ 0.79
C9orf40Q8IXQ3 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
C9orf40Q8IXQ3 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.98■□□□□ 0.79
C9orf40Q8IXQ3 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.98■□□□□ 0.79
C9orf40Q8IXQ3 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
C9orf40Q8IXQ3 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
C9orf40Q8IXQ3 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.98■□□□□ 0.79
C9orf40Q8IXQ3 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.98■□□□□ 0.79
C9orf40Q8IXQ3 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
C9orf40Q8IXQ3 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
C9orf40Q8IXQ3 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.97■□□□□ 0.79
C9orf40Q8IXQ3 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
C9orf40Q8IXQ3 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19.97■□□□□ 0.79
C9orf40Q8IXQ3 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
C9orf40Q8IXQ3 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
C9orf40Q8IXQ3 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.97■□□□□ 0.79
C9orf40Q8IXQ3 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC19.97■□□□□ 0.79
C9orf40Q8IXQ3 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.97■□□□□ 0.79
C9orf40Q8IXQ3 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
C9orf40Q8IXQ3 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
C9orf40Q8IXQ3 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.97■□□□□ 0.79
C9orf40Q8IXQ3 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
C9orf40Q8IXQ3 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
C9orf40Q8IXQ3 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
C9orf40Q8IXQ3 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.97■□□□□ 0.79
C9orf40Q8IXQ3 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
C9orf40Q8IXQ3 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
C9orf40Q8IXQ3 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.97■□□□□ 0.79
C9orf40Q8IXQ3 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
C9orf40Q8IXQ3 LINC02228-203ENST00000641970 1355 ntBASIC19.96■□□□□ 0.79
C9orf40Q8IXQ3 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.96■□□□□ 0.79
C9orf40Q8IXQ3 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
C9orf40Q8IXQ3 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
C9orf40Q8IXQ3 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.96■□□□□ 0.79
C9orf40Q8IXQ3 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
C9orf40Q8IXQ3 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
C9orf40Q8IXQ3 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.96■□□□□ 0.79
C9orf40Q8IXQ3 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.96■□□□□ 0.79
C9orf40Q8IXQ3 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.96■□□□□ 0.79
C9orf40Q8IXQ3 AC242852.2-201ENST00000615738 1807 ntBASIC19.96■□□□□ 0.79
C9orf40Q8IXQ3 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
C9orf40Q8IXQ3 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
C9orf40Q8IXQ3 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
C9orf40Q8IXQ3 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
C9orf40Q8IXQ3 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.95■□□□□ 0.79
C9orf40Q8IXQ3 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.95■□□□□ 0.78
C9orf40Q8IXQ3 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
C9orf40Q8IXQ3 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.95■□□□□ 0.78
C9orf40Q8IXQ3 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
C9orf40Q8IXQ3 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.95■□□□□ 0.78
C9orf40Q8IXQ3 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
C9orf40Q8IXQ3 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
C9orf40Q8IXQ3 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
C9orf40Q8IXQ3 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC19.95■□□□□ 0.78
C9orf40Q8IXQ3 CCDC92B-201ENST00000575506 885 ntBASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms