Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.1■□□□□ 0.65
LINC00346Q8IVM7 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LINC00346Q8IVM7 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LINC00346Q8IVM7 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC19.1■□□□□ 0.65
LINC00346Q8IVM7 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
LINC00346Q8IVM7 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LINC00346Q8IVM7 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
LINC00346Q8IVM7 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
LINC00346Q8IVM7 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
LINC00346Q8IVM7 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
LINC00346Q8IVM7 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LINC00346Q8IVM7 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
LINC00346Q8IVM7 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.09■□□□□ 0.65
LINC00346Q8IVM7 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LINC00346Q8IVM7 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LINC00346Q8IVM7 OR2I1P-207ENST00000453522 948 ntBASIC19.09■□□□□ 0.65
LINC00346Q8IVM7 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LINC00346Q8IVM7 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC19.09■□□□□ 0.65
LINC00346Q8IVM7 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LINC00346Q8IVM7 FAM99A-202ENST00000538190 1989 ntBASIC19.09■□□□□ 0.65
LINC00346Q8IVM7 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LINC00346Q8IVM7 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LINC00346Q8IVM7 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LINC00346Q8IVM7 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LINC00346Q8IVM7 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
LINC00346Q8IVM7 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.65
LINC00346Q8IVM7 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
LINC00346Q8IVM7 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
LINC00346Q8IVM7 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.08■□□□□ 0.65
LINC00346Q8IVM7 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
LINC00346Q8IVM7 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
LINC00346Q8IVM7 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.08■□□□□ 0.64
LINC00346Q8IVM7 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LINC00346Q8IVM7 HES6-206ENST00000409574 738 ntTSL 2 BASIC19.08■□□□□ 0.64
LINC00346Q8IVM7 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.08■□□□□ 0.64
LINC00346Q8IVM7 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.08■□□□□ 0.64
LINC00346Q8IVM7 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC19.08■□□□□ 0.64
LINC00346Q8IVM7 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
LINC00346Q8IVM7 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
LINC00346Q8IVM7 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
LINC00346Q8IVM7 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
LINC00346Q8IVM7 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
LINC00346Q8IVM7 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LINC00346Q8IVM7 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.64
LINC00346Q8IVM7 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
LINC00346Q8IVM7 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.08■□□□□ 0.64
LINC00346Q8IVM7 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
LINC00346Q8IVM7 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LINC00346Q8IVM7 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LINC00346Q8IVM7 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
LINC00346Q8IVM7 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LINC00346Q8IVM7 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC19.07■□□□□ 0.64
LINC00346Q8IVM7 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LINC00346Q8IVM7 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC19.07■□□□□ 0.64
LINC00346Q8IVM7 AC079089.2-201ENST00000531211 1277 ntBASIC19.07■□□□□ 0.64
LINC00346Q8IVM7 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LINC00346Q8IVM7 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC19.07■□□□□ 0.64
LINC00346Q8IVM7 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
LINC00346Q8IVM7 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LINC00346Q8IVM7 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LINC00346Q8IVM7 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LINC00346Q8IVM7 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
LINC00346Q8IVM7 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LINC00346Q8IVM7 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LINC00346Q8IVM7 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
LINC00346Q8IVM7 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.06■□□□□ 0.64
LINC00346Q8IVM7 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.06■□□□□ 0.64
LINC00346Q8IVM7 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.06■□□□□ 0.64
LINC00346Q8IVM7 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
LINC00346Q8IVM7 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC19.06■□□□□ 0.64
LINC00346Q8IVM7 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC19.06■□□□□ 0.64
LINC00346Q8IVM7 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
LINC00346Q8IVM7 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
LINC00346Q8IVM7 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
LINC00346Q8IVM7 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.06■□□□□ 0.64
LINC00346Q8IVM7 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.05■□□□□ 0.64
LINC00346Q8IVM7 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LINC00346Q8IVM7 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
LINC00346Q8IVM7 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
LINC00346Q8IVM7 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.05■□□□□ 0.64
LINC00346Q8IVM7 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LINC00346Q8IVM7 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LINC00346Q8IVM7 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.05■□□□□ 0.64
LINC00346Q8IVM7 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
LINC00346Q8IVM7 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.05■□□□□ 0.64
LINC00346Q8IVM7 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC19.05■□□□□ 0.64
LINC00346Q8IVM7 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
LINC00346Q8IVM7 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LINC00346Q8IVM7 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.05■□□□□ 0.64
LINC00346Q8IVM7 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.05■□□□□ 0.64
LINC00346Q8IVM7 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LINC00346Q8IVM7 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LINC00346Q8IVM7 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LINC00346Q8IVM7 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
LINC00346Q8IVM7 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC19.05■□□□□ 0.64
LINC00346Q8IVM7 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
LINC00346Q8IVM7 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LINC00346Q8IVM7 AL137060.1-201ENST00000618151 2648 ntBASIC19.04■□□□□ 0.64
LINC00346Q8IVM7 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.04■□□□□ 0.64
LINC00346Q8IVM7 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms