Protein–RNA interactions for Protein: Q86VP3

PACS2, Phosphofurin acidic cluster sorting protein 2, humanhuman

Predictions only

Length 889 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2Q86VP3 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PACS2Q86VP3 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PACS2Q86VP3 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PACS2Q86VP3 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC21.63■■□□□ 1.05
PACS2Q86VP3 AC103724.3-201ENST00000564481 992 ntBASIC21.63■■□□□ 1.05
PACS2Q86VP3 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC21.63■■□□□ 1.05
PACS2Q86VP3 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
PACS2Q86VP3 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.63■■□□□ 1.05
PACS2Q86VP3 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
PACS2Q86VP3 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
PACS2Q86VP3 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC21.63■■□□□ 1.05
PACS2Q86VP3 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
PACS2Q86VP3 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PACS2Q86VP3 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
PACS2Q86VP3 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
PACS2Q86VP3 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC21.62■■□□□ 1.05
PACS2Q86VP3 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
PACS2Q86VP3 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PACS2Q86VP3 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC21.62■■□□□ 1.05
PACS2Q86VP3 AL031848.2-201ENST00000607670 837 ntBASIC21.62■■□□□ 1.05
PACS2Q86VP3 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.62■■□□□ 1.05
PACS2Q86VP3 LETM1P2-201ENST00000597330 2178 ntBASIC21.62■■□□□ 1.05
PACS2Q86VP3 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC21.62■■□□□ 1.05
PACS2Q86VP3 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PACS2Q86VP3 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
PACS2Q86VP3 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC21.62■■□□□ 1.05
PACS2Q86VP3 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21.62■■□□□ 1.05
PACS2Q86VP3 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
PACS2Q86VP3 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PACS2Q86VP3 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PACS2Q86VP3 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.61■■□□□ 1.05
PACS2Q86VP3 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
PACS2Q86VP3 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PACS2Q86VP3 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PACS2Q86VP3 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
PACS2Q86VP3 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
PACS2Q86VP3 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
PACS2Q86VP3 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PACS2Q86VP3 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PACS2Q86VP3 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
PACS2Q86VP3 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
PACS2Q86VP3 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PACS2Q86VP3 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PACS2Q86VP3 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
PACS2Q86VP3 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC21.61■■□□□ 1.05
PACS2Q86VP3 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.61■■□□□ 1.05
PACS2Q86VP3 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PACS2Q86VP3 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PACS2Q86VP3 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.6■■□□□ 1.05
PACS2Q86VP3 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC21.6■■□□□ 1.05
PACS2Q86VP3 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
PACS2Q86VP3 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PACS2Q86VP3 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
PACS2Q86VP3 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PACS2Q86VP3 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PACS2Q86VP3 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC21.6■■□□□ 1.05
PACS2Q86VP3 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC21.6■■□□□ 1.05
PACS2Q86VP3 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PACS2Q86VP3 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC21.6■■□□□ 1.05
PACS2Q86VP3 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.6■■□□□ 1.05
PACS2Q86VP3 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PACS2Q86VP3 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC21.59■■□□□ 1.05
PACS2Q86VP3 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PACS2Q86VP3 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PACS2Q86VP3 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PACS2Q86VP3 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC21.59■■□□□ 1.05
PACS2Q86VP3 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PACS2Q86VP3 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PACS2Q86VP3 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC21.59■■□□□ 1.05
PACS2Q86VP3 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC21.59■■□□□ 1.05
PACS2Q86VP3 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC21.58■■□□□ 1.05
PACS2Q86VP3 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.58■■□□□ 1.05
PACS2Q86VP3 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC21.58■■□□□ 1.05
PACS2Q86VP3 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PACS2Q86VP3 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PACS2Q86VP3 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
PACS2Q86VP3 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
PACS2Q86VP3 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
PACS2Q86VP3 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
PACS2Q86VP3 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
PACS2Q86VP3 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
PACS2Q86VP3 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.04
PACS2Q86VP3 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
PACS2Q86VP3 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC21.58■■□□□ 1.04
PACS2Q86VP3 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
PACS2Q86VP3 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
PACS2Q86VP3 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PACS2Q86VP3 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PACS2Q86VP3 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PACS2Q86VP3 KRT18P24-201ENST00000344739 1156 ntBASIC21.57■■□□□ 1.04
PACS2Q86VP3 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
PACS2Q86VP3 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC21.57■■□□□ 1.04
PACS2Q86VP3 AL451085.2-201ENST00000605085 799 ntBASIC21.57■■□□□ 1.04
PACS2Q86VP3 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC21.57■■□□□ 1.04
PACS2Q86VP3 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PACS2Q86VP3 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC21.57■■□□□ 1.04
PACS2Q86VP3 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC21.57■■□□□ 1.04
PACS2Q86VP3 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PACS2Q86VP3 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.57■■□□□ 1.04
PACS2Q86VP3 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms