Protein–RNA interactions for Protein: Q86UC2

RSPH3, Radial spoke head protein 3 homolog, humanhuman

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPH3Q86UC2 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC23.85■■□□□ 1.41
RSPH3Q86UC2 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC23.85■■□□□ 1.41
RSPH3Q86UC2 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RSPH3Q86UC2 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC23.85■■□□□ 1.41
RSPH3Q86UC2 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
RSPH3Q86UC2 LINC01960-201ENST00000563759 1884 ntBASIC23.85■■□□□ 1.41
RSPH3Q86UC2 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RSPH3Q86UC2 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RSPH3Q86UC2 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
RSPH3Q86UC2 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
RSPH3Q86UC2 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
RSPH3Q86UC2 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RSPH3Q86UC2 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
RSPH3Q86UC2 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RSPH3Q86UC2 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC23.84■■□□□ 1.41
RSPH3Q86UC2 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC23.84■■□□□ 1.41
RSPH3Q86UC2 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC23.84■■□□□ 1.41
RSPH3Q86UC2 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC23.84■■□□□ 1.41
RSPH3Q86UC2 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC23.84■■□□□ 1.41
RSPH3Q86UC2 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RSPH3Q86UC2 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
RSPH3Q86UC2 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
RSPH3Q86UC2 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
RSPH3Q86UC2 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
RSPH3Q86UC2 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC23.83■■□□□ 1.41
RSPH3Q86UC2 AC104187.1-201ENST00000607510 612 ntBASIC23.83■■□□□ 1.41
RSPH3Q86UC2 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
RSPH3Q86UC2 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
RSPH3Q86UC2 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC23.82■■□□□ 1.4
RSPH3Q86UC2 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
RSPH3Q86UC2 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC23.82■■□□□ 1.4
RSPH3Q86UC2 PPP1R14BP3-201ENST00000509033 445 ntBASIC23.82■■□□□ 1.4
RSPH3Q86UC2 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RSPH3Q86UC2 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RSPH3Q86UC2 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
RSPH3Q86UC2 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC23.82■■□□□ 1.4
RSPH3Q86UC2 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC23.82■■□□□ 1.4
RSPH3Q86UC2 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
RSPH3Q86UC2 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
RSPH3Q86UC2 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC23.81■■□□□ 1.4
RSPH3Q86UC2 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC23.81■■□□□ 1.4
RSPH3Q86UC2 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
RSPH3Q86UC2 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC23.81■■□□□ 1.4
RSPH3Q86UC2 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
RSPH3Q86UC2 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
RSPH3Q86UC2 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
RSPH3Q86UC2 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
RSPH3Q86UC2 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RSPH3Q86UC2 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RSPH3Q86UC2 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC23.8■■□□□ 1.4
RSPH3Q86UC2 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC23.8■■□□□ 1.4
RSPH3Q86UC2 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
RSPH3Q86UC2 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RSPH3Q86UC2 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RSPH3Q86UC2 THRA-202ENST00000394121 2260 ntTSL 2 BASIC23.79■■□□□ 1.4
RSPH3Q86UC2 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
RSPH3Q86UC2 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
RSPH3Q86UC2 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC23.79■■□□□ 1.4
RSPH3Q86UC2 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
RSPH3Q86UC2 MFF-207ENST00000409565 1548 ntTSL 2 BASIC23.79■■□□□ 1.4
RSPH3Q86UC2 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
RSPH3Q86UC2 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
RSPH3Q86UC2 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RSPH3Q86UC2 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
RSPH3Q86UC2 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC23.78■■□□□ 1.4
RSPH3Q86UC2 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC23.78■■□□□ 1.4
RSPH3Q86UC2 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC23.78■■□□□ 1.4
RSPH3Q86UC2 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
RSPH3Q86UC2 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
RSPH3Q86UC2 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
RSPH3Q86UC2 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
RSPH3Q86UC2 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RSPH3Q86UC2 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
RSPH3Q86UC2 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC23.77■■□□□ 1.4
RSPH3Q86UC2 CROCCP5-201ENST00000436658 830 ntBASIC23.77■■□□□ 1.4
RSPH3Q86UC2 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
RSPH3Q86UC2 DENND3-207ENST00000518347 850 ntTSL 2 BASIC23.77■■□□□ 1.4
RSPH3Q86UC2 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC23.77■■□□□ 1.4
RSPH3Q86UC2 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC23.77■■□□□ 1.4
RSPH3Q86UC2 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
RSPH3Q86UC2 PXK-203ENST00000383715 1756 ntTSL 5 BASIC23.77■■□□□ 1.4
RSPH3Q86UC2 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RSPH3Q86UC2 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
RSPH3Q86UC2 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
RSPH3Q86UC2 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RSPH3Q86UC2 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RSPH3Q86UC2 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
RSPH3Q86UC2 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC23.76■■□□□ 1.39
RSPH3Q86UC2 FXN-202ENST00000396364 980 ntTSL 5 BASIC23.76■■□□□ 1.39
RSPH3Q86UC2 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC23.76■■□□□ 1.39
RSPH3Q86UC2 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC23.76■■□□□ 1.39
RSPH3Q86UC2 AC055733.4-201ENST00000638462 1354 ntBASIC23.76■■□□□ 1.39
RSPH3Q86UC2 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
RSPH3Q86UC2 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC23.75■■□□□ 1.39
RSPH3Q86UC2 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
RSPH3Q86UC2 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
RSPH3Q86UC2 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
RSPH3Q86UC2 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC23.75■■□□□ 1.39
RSPH3Q86UC2 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RSPH3Q86UC2 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms