Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VPS13BQ7Z7G8 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC13.49□□□□□ -0.25
VPS13BQ7Z7G8 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC13.49□□□□□ -0.25
VPS13BQ7Z7G8 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
VPS13BQ7Z7G8 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
VPS13BQ7Z7G8 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
VPS13BQ7Z7G8 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC13.48□□□□□ -0.25
VPS13BQ7Z7G8 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
VPS13BQ7Z7G8 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
VPS13BQ7Z7G8 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
VPS13BQ7Z7G8 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
VPS13BQ7Z7G8 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
VPS13BQ7Z7G8 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
VPS13BQ7Z7G8 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
VPS13BQ7Z7G8 AC211429.1-201ENST00000415277 523 ntBASIC13.48□□□□□ -0.25
VPS13BQ7Z7G8 DUSP5P2-201ENST00000426873 1033 ntBASIC13.48□□□□□ -0.25
VPS13BQ7Z7G8 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC13.48□□□□□ -0.25
VPS13BQ7Z7G8 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
VPS13BQ7Z7G8 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
VPS13BQ7Z7G8 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
VPS13BQ7Z7G8 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
VPS13BQ7Z7G8 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
VPS13BQ7Z7G8 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
VPS13BQ7Z7G8 KRT18P29-201ENST00000397031 1267 ntBASIC13.48□□□□□ -0.25
VPS13BQ7Z7G8 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC13.48□□□□□ -0.25
VPS13BQ7Z7G8 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC13.48□□□□□ -0.25
VPS13BQ7Z7G8 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
VPS13BQ7Z7G8 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
VPS13BQ7Z7G8 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC13.47□□□□□ -0.25
VPS13BQ7Z7G8 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
VPS13BQ7Z7G8 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
VPS13BQ7Z7G8 AL139125.2-201ENST00000623134 1869 ntBASIC13.47□□□□□ -0.25
VPS13BQ7Z7G8 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC13.47□□□□□ -0.25
VPS13BQ7Z7G8 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC13.47□□□□□ -0.25
VPS13BQ7Z7G8 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
VPS13BQ7Z7G8 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
VPS13BQ7Z7G8 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
VPS13BQ7Z7G8 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
VPS13BQ7Z7G8 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
VPS13BQ7Z7G8 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC13.47□□□□□ -0.25
VPS13BQ7Z7G8 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC13.47□□□□□ -0.25
VPS13BQ7Z7G8 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC13.47□□□□□ -0.25
VPS13BQ7Z7G8 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
VPS13BQ7Z7G8 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
VPS13BQ7Z7G8 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
VPS13BQ7Z7G8 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
VPS13BQ7Z7G8 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC13.46□□□□□ -0.25
VPS13BQ7Z7G8 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC13.46□□□□□ -0.25
VPS13BQ7Z7G8 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC13.46□□□□□ -0.25
VPS13BQ7Z7G8 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC13.46□□□□□ -0.25
VPS13BQ7Z7G8 MFF-207ENST00000409565 1548 ntTSL 2 BASIC13.46□□□□□ -0.25
VPS13BQ7Z7G8 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
VPS13BQ7Z7G8 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
VPS13BQ7Z7G8 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC13.46□□□□□ -0.25
VPS13BQ7Z7G8 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
VPS13BQ7Z7G8 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
VPS13BQ7Z7G8 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
VPS13BQ7Z7G8 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC13.46□□□□□ -0.26
VPS13BQ7Z7G8 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
VPS13BQ7Z7G8 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
VPS13BQ7Z7G8 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
VPS13BQ7Z7G8 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
VPS13BQ7Z7G8 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC13.46□□□□□ -0.26
VPS13BQ7Z7G8 AC104187.1-201ENST00000607510 612 ntBASIC13.45□□□□□ -0.26
VPS13BQ7Z7G8 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
VPS13BQ7Z7G8 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
VPS13BQ7Z7G8 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC13.45□□□□□ -0.26
VPS13BQ7Z7G8 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC13.45□□□□□ -0.26
VPS13BQ7Z7G8 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
VPS13BQ7Z7G8 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC13.45□□□□□ -0.26
VPS13BQ7Z7G8 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
VPS13BQ7Z7G8 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC13.45□□□□□ -0.26
VPS13BQ7Z7G8 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC13.45□□□□□ -0.26
VPS13BQ7Z7G8 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC13.45□□□□□ -0.26
VPS13BQ7Z7G8 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
VPS13BQ7Z7G8 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC13.45□□□□□ -0.26
VPS13BQ7Z7G8 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
VPS13BQ7Z7G8 RARRES2P4-201ENST00000514074 484 ntBASIC13.45□□□□□ -0.26
VPS13BQ7Z7G8 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
VPS13BQ7Z7G8 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC13.44□□□□□ -0.26
VPS13BQ7Z7G8 AC133041.1-202ENST00000642053 222 ntBASIC13.44□□□□□ -0.26
VPS13BQ7Z7G8 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
VPS13BQ7Z7G8 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
VPS13BQ7Z7G8 DUSP8P5-201ENST00000422884 1815 ntBASIC13.44□□□□□ -0.26
VPS13BQ7Z7G8 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
VPS13BQ7Z7G8 DUSP8P3-201ENST00000399571 1760 ntBASIC13.44□□□□□ -0.26
VPS13BQ7Z7G8 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC13.44□□□□□ -0.26
VPS13BQ7Z7G8 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
VPS13BQ7Z7G8 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
VPS13BQ7Z7G8 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
VPS13BQ7Z7G8 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
VPS13BQ7Z7G8 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
VPS13BQ7Z7G8 AC079140.4-201ENST00000507448 529 ntBASIC13.44□□□□□ -0.26
VPS13BQ7Z7G8 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC13.44□□□□□ -0.26
VPS13BQ7Z7G8 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC13.44□□□□□ -0.26
VPS13BQ7Z7G8 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC13.44□□□□□ -0.26
VPS13BQ7Z7G8 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
VPS13BQ7Z7G8 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
VPS13BQ7Z7G8 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC13.43□□□□□ -0.26
VPS13BQ7Z7G8 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC13.43□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 946.6 ms