Protein–RNA interactions for Protein: Q7Z401

DENND4A, C-myc promoter-binding protein, humanhuman

Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4AQ7Z401 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
DENND4AQ7Z401 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
DENND4AQ7Z401 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
DENND4AQ7Z401 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC22.51■■□□□ 1.19
DENND4AQ7Z401 AC008687.6-201ENST00000596318 630 ntBASIC22.51■■□□□ 1.19
DENND4AQ7Z401 MARS-234ENST00000630571 216 ntTSL 5 BASIC22.51■■□□□ 1.19
DENND4AQ7Z401 MARS-235ENST00000630803 183 ntTSL 3 BASIC22.51■■□□□ 1.19
DENND4AQ7Z401 AC004812.2-201ENST00000611079 2094 ntBASIC22.5■■□□□ 1.19
DENND4AQ7Z401 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC22.5■■□□□ 1.19
DENND4AQ7Z401 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
DENND4AQ7Z401 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
DENND4AQ7Z401 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
DENND4AQ7Z401 DET1-205ENST00000558413 583 ntTSL 4 BASIC22.5■■□□□ 1.19
DENND4AQ7Z401 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC22.5■■□□□ 1.19
DENND4AQ7Z401 PFKL-212ENST00000628044 129 ntTSL 3 BASIC22.5■■□□□ 1.19
DENND4AQ7Z401 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
DENND4AQ7Z401 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC22.5■■□□□ 1.19
DENND4AQ7Z401 AC055733.4-201ENST00000638462 1354 ntBASIC22.5■■□□□ 1.19
DENND4AQ7Z401 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
DENND4AQ7Z401 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
DENND4AQ7Z401 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
DENND4AQ7Z401 PHB2-213ENST00000546111 858 ntTSL 2 BASIC22.49■■□□□ 1.19
DENND4AQ7Z401 SLC7A5P1-201ENST00000568957 537 ntBASIC22.49■■□□□ 1.19
DENND4AQ7Z401 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
DENND4AQ7Z401 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
DENND4AQ7Z401 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
DENND4AQ7Z401 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC22.49■■□□□ 1.19
DENND4AQ7Z401 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC22.49■■□□□ 1.19
DENND4AQ7Z401 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
DENND4AQ7Z401 POU5F1P3-201ENST00000428824 1078 ntBASIC22.49■■□□□ 1.19
DENND4AQ7Z401 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC22.49■■□□□ 1.19
DENND4AQ7Z401 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
DENND4AQ7Z401 DUSP8P5-201ENST00000422884 1815 ntBASIC22.49■■□□□ 1.19
DENND4AQ7Z401 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
DENND4AQ7Z401 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
DENND4AQ7Z401 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC22.48■■□□□ 1.19
DENND4AQ7Z401 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC22.48■■□□□ 1.19
DENND4AQ7Z401 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
DENND4AQ7Z401 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC22.48■■□□□ 1.19
DENND4AQ7Z401 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC22.48■■□□□ 1.19
DENND4AQ7Z401 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
DENND4AQ7Z401 AC098590.1-201ENST00000468126 897 ntBASIC22.47■■□□□ 1.19
DENND4AQ7Z401 AP001160.3-201ENST00000601484 763 ntBASIC22.47■■□□□ 1.19
DENND4AQ7Z401 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC22.47■■□□□ 1.19
DENND4AQ7Z401 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC22.47■■□□□ 1.19
DENND4AQ7Z401 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
DENND4AQ7Z401 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
DENND4AQ7Z401 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
DENND4AQ7Z401 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
DENND4AQ7Z401 AC007322.4-201ENST00000509611 723 ntBASIC22.47■■□□□ 1.19
DENND4AQ7Z401 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
DENND4AQ7Z401 AC133041.1-202ENST00000642053 222 ntBASIC22.47■■□□□ 1.19
DENND4AQ7Z401 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
DENND4AQ7Z401 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
DENND4AQ7Z401 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
DENND4AQ7Z401 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
DENND4AQ7Z401 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC22.46■■□□□ 1.19
DENND4AQ7Z401 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
DENND4AQ7Z401 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
DENND4AQ7Z401 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
DENND4AQ7Z401 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.19
DENND4AQ7Z401 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
DENND4AQ7Z401 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC22.45■■□□□ 1.19
DENND4AQ7Z401 RNA5SP413-201ENST00000516373 109 ntBASIC22.45■■□□□ 1.19
DENND4AQ7Z401 AC105036.2-201ENST00000569468 176 ntBASIC22.45■■□□□ 1.19
DENND4AQ7Z401 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
DENND4AQ7Z401 ABCB10P4-201ENST00000566803 2184 ntBASIC22.45■■□□□ 1.18
DENND4AQ7Z401 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC22.45■■□□□ 1.18
DENND4AQ7Z401 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
DENND4AQ7Z401 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC22.45■■□□□ 1.18
DENND4AQ7Z401 FAM201B-201ENST00000458407 597 ntBASIC22.45■■□□□ 1.18
DENND4AQ7Z401 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
DENND4AQ7Z401 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC22.45■■□□□ 1.18
DENND4AQ7Z401 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
DENND4AQ7Z401 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC22.44■■□□□ 1.18
DENND4AQ7Z401 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC22.44■■□□□ 1.18
DENND4AQ7Z401 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC22.44■■□□□ 1.18
DENND4AQ7Z401 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC22.44■■□□□ 1.18
DENND4AQ7Z401 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC22.44■■□□□ 1.18
DENND4AQ7Z401 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC22.44■■□□□ 1.18
DENND4AQ7Z401 AC083880.1-201ENST00000608266 535 ntBASIC22.44■■□□□ 1.18
DENND4AQ7Z401 AC068338.2-201ENST00000563278 1430 ntBASIC22.44■■□□□ 1.18
DENND4AQ7Z401 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC22.44■■□□□ 1.18
DENND4AQ7Z401 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC22.44■■□□□ 1.18
DENND4AQ7Z401 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
DENND4AQ7Z401 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
DENND4AQ7Z401 MKRN4P-201ENST00000444706 1521 ntBASIC22.43■■□□□ 1.18
DENND4AQ7Z401 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
DENND4AQ7Z401 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC22.43■■□□□ 1.18
DENND4AQ7Z401 RPS2P52-201ENST00000469610 820 ntBASIC22.43■■□□□ 1.18
DENND4AQ7Z401 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC22.43■■□□□ 1.18
DENND4AQ7Z401 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC22.43■■□□□ 1.18
DENND4AQ7Z401 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC22.43■■□□□ 1.18
DENND4AQ7Z401 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC22.43■■□□□ 1.18
DENND4AQ7Z401 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC22.43■■□□□ 1.18
DENND4AQ7Z401 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
DENND4AQ7Z401 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
DENND4AQ7Z401 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC22.43■■□□□ 1.18
DENND4AQ7Z401 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC22.42■■□□□ 1.18
DENND4AQ7Z401 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms