Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TUBA1AQ71U36 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
TUBA1AQ71U36 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TUBA1AQ71U36 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
TUBA1AQ71U36 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
TUBA1AQ71U36 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TUBA1AQ71U36 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
TUBA1AQ71U36 FAM99A-202ENST00000538190 1989 ntBASIC19.83■□□□□ 0.76
TUBA1AQ71U36 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TUBA1AQ71U36 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TUBA1AQ71U36 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TUBA1AQ71U36 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TUBA1AQ71U36 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
TUBA1AQ71U36 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
TUBA1AQ71U36 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
TUBA1AQ71U36 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TUBA1AQ71U36 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC19.82■□□□□ 0.76
TUBA1AQ71U36 QDPR-206ENST00000508623 601 ntTSL 3 BASIC19.82■□□□□ 0.76
TUBA1AQ71U36 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
TUBA1AQ71U36 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.82■□□□□ 0.76
TUBA1AQ71U36 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TUBA1AQ71U36 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
TUBA1AQ71U36 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TUBA1AQ71U36 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.81■□□□□ 0.76
TUBA1AQ71U36 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
TUBA1AQ71U36 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TUBA1AQ71U36 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
TUBA1AQ71U36 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TUBA1AQ71U36 AC080038.3-201ENST00000623346 1952 ntBASIC19.81■□□□□ 0.76
TUBA1AQ71U36 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
TUBA1AQ71U36 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TUBA1AQ71U36 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TUBA1AQ71U36 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.81■□□□□ 0.76
TUBA1AQ71U36 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
TUBA1AQ71U36 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TUBA1AQ71U36 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TUBA1AQ71U36 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
TUBA1AQ71U36 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TUBA1AQ71U36 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TUBA1AQ71U36 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TUBA1AQ71U36 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TUBA1AQ71U36 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TUBA1AQ71U36 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC19.8■□□□□ 0.76
TUBA1AQ71U36 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TUBA1AQ71U36 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TUBA1AQ71U36 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.8■□□□□ 0.76
TUBA1AQ71U36 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.8■□□□□ 0.76
TUBA1AQ71U36 AC008406.3-201ENST00000620001 1374 ntBASIC19.8■□□□□ 0.76
TUBA1AQ71U36 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
TUBA1AQ71U36 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TUBA1AQ71U36 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TUBA1AQ71U36 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TUBA1AQ71U36 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
TUBA1AQ71U36 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TUBA1AQ71U36 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
TUBA1AQ71U36 AC005229.4-201ENST00000610085 2198 ntBASIC19.79■□□□□ 0.76
TUBA1AQ71U36 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TUBA1AQ71U36 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TUBA1AQ71U36 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TUBA1AQ71U36 MIR4466-201ENST00000606121 54 ntBASIC19.79■□□□□ 0.76
TUBA1AQ71U36 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TUBA1AQ71U36 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TUBA1AQ71U36 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.79■□□□□ 0.76
TUBA1AQ71U36 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
TUBA1AQ71U36 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TUBA1AQ71U36 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
TUBA1AQ71U36 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TUBA1AQ71U36 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TUBA1AQ71U36 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TUBA1AQ71U36 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TUBA1AQ71U36 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
TUBA1AQ71U36 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
TUBA1AQ71U36 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
TUBA1AQ71U36 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TUBA1AQ71U36 AL512631.2-201ENST00000604634 923 ntBASIC19.78■□□□□ 0.76
TUBA1AQ71U36 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC19.78■□□□□ 0.76
TUBA1AQ71U36 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC19.78■□□□□ 0.76
TUBA1AQ71U36 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.78■□□□□ 0.76
TUBA1AQ71U36 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TUBA1AQ71U36 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TUBA1AQ71U36 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
TUBA1AQ71U36 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
TUBA1AQ71U36 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TUBA1AQ71U36 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
TUBA1AQ71U36 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC19.77■□□□□ 0.76
TUBA1AQ71U36 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
TUBA1AQ71U36 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
TUBA1AQ71U36 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TUBA1AQ71U36 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TUBA1AQ71U36 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TUBA1AQ71U36 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC19.77■□□□□ 0.76
TUBA1AQ71U36 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
TUBA1AQ71U36 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC19.77■□□□□ 0.76
TUBA1AQ71U36 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
TUBA1AQ71U36 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TUBA1AQ71U36 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TUBA1AQ71U36 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TUBA1AQ71U36 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
TUBA1AQ71U36 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
TUBA1AQ71U36 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms