Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC23.51■■□□□ 1.35
CNKSR3Q6P9H4 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
CNKSR3Q6P9H4 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC23.5■■□□□ 1.35
CNKSR3Q6P9H4 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC23.5■■□□□ 1.35
CNKSR3Q6P9H4 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC23.5■■□□□ 1.35
CNKSR3Q6P9H4 AC020928.2-201ENST00000588717 2197 ntBASIC23.5■■□□□ 1.35
CNKSR3Q6P9H4 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC23.5■■□□□ 1.35
CNKSR3Q6P9H4 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC23.5■■□□□ 1.35
CNKSR3Q6P9H4 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC23.5■■□□□ 1.35
CNKSR3Q6P9H4 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CNKSR3Q6P9H4 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CNKSR3Q6P9H4 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
CNKSR3Q6P9H4 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CNKSR3Q6P9H4 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
CNKSR3Q6P9H4 DUSP8P5-201ENST00000422884 1815 ntBASIC23.49■■□□□ 1.35
CNKSR3Q6P9H4 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
CNKSR3Q6P9H4 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
CNKSR3Q6P9H4 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
CNKSR3Q6P9H4 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC23.49■■□□□ 1.35
CNKSR3Q6P9H4 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
CNKSR3Q6P9H4 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC23.49■■□□□ 1.35
CNKSR3Q6P9H4 TBCB-214ENST00000629269 413 ntTSL 5 BASIC23.49■■□□□ 1.35
CNKSR3Q6P9H4 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
CNKSR3Q6P9H4 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC23.49■■□□□ 1.35
CNKSR3Q6P9H4 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
CNKSR3Q6P9H4 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
CNKSR3Q6P9H4 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC23.48■■□□□ 1.35
CNKSR3Q6P9H4 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
CNKSR3Q6P9H4 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC23.48■■□□□ 1.35
CNKSR3Q6P9H4 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC23.48■■□□□ 1.35
CNKSR3Q6P9H4 FXN-202ENST00000396364 980 ntTSL 5 BASIC23.48■■□□□ 1.35
CNKSR3Q6P9H4 AC098934.4-201ENST00000564127 592 ntBASIC23.48■■□□□ 1.35
CNKSR3Q6P9H4 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC23.48■■□□□ 1.35
CNKSR3Q6P9H4 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC23.48■■□□□ 1.35
CNKSR3Q6P9H4 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
CNKSR3Q6P9H4 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
CNKSR3Q6P9H4 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
CNKSR3Q6P9H4 ABCB10P4-201ENST00000566803 2184 ntBASIC23.48■■□□□ 1.35
CNKSR3Q6P9H4 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
CNKSR3Q6P9H4 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC23.48■■□□□ 1.35
CNKSR3Q6P9H4 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC23.47■■□□□ 1.35
CNKSR3Q6P9H4 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
CNKSR3Q6P9H4 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
CNKSR3Q6P9H4 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
CNKSR3Q6P9H4 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC23.47■■□□□ 1.35
CNKSR3Q6P9H4 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC23.47■■□□□ 1.35
CNKSR3Q6P9H4 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC23.47■■□□□ 1.35
CNKSR3Q6P9H4 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
CNKSR3Q6P9H4 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC23.47■■□□□ 1.35
CNKSR3Q6P9H4 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC23.47■■□□□ 1.35
CNKSR3Q6P9H4 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC23.46■■□□□ 1.35
CNKSR3Q6P9H4 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC23.46■■□□□ 1.35
CNKSR3Q6P9H4 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
CNKSR3Q6P9H4 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC23.46■■□□□ 1.35
CNKSR3Q6P9H4 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC23.46■■□□□ 1.35
CNKSR3Q6P9H4 AC079089.2-201ENST00000531211 1277 ntBASIC23.46■■□□□ 1.35
CNKSR3Q6P9H4 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC23.46■■□□□ 1.35
CNKSR3Q6P9H4 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC23.46■■□□□ 1.35
CNKSR3Q6P9H4 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC23.45■■□□□ 1.35
CNKSR3Q6P9H4 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.35
CNKSR3Q6P9H4 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
CNKSR3Q6P9H4 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC23.45■■□□□ 1.35
CNKSR3Q6P9H4 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
CNKSR3Q6P9H4 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC23.45■■□□□ 1.34
CNKSR3Q6P9H4 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC23.45■■□□□ 1.34
CNKSR3Q6P9H4 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
CNKSR3Q6P9H4 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC23.45■■□□□ 1.34
CNKSR3Q6P9H4 AC013268.1-206ENST00000638368 961 ntBASIC23.45■■□□□ 1.34
CNKSR3Q6P9H4 AC112229.1-201ENST00000639295 961 ntBASIC23.45■■□□□ 1.34
CNKSR3Q6P9H4 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
CNKSR3Q6P9H4 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
CNKSR3Q6P9H4 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC23.44■■□□□ 1.34
CNKSR3Q6P9H4 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC23.44■■□□□ 1.34
CNKSR3Q6P9H4 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
CNKSR3Q6P9H4 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC23.44■■□□□ 1.34
CNKSR3Q6P9H4 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC23.44■■□□□ 1.34
CNKSR3Q6P9H4 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
CNKSR3Q6P9H4 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC23.44■■□□□ 1.34
CNKSR3Q6P9H4 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC23.44■■□□□ 1.34
CNKSR3Q6P9H4 MIR4758-201ENST00000577688 71 ntBASIC23.44■■□□□ 1.34
CNKSR3Q6P9H4 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
CNKSR3Q6P9H4 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
CNKSR3Q6P9H4 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC23.44■■□□□ 1.34
CNKSR3Q6P9H4 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC23.44■■□□□ 1.34
CNKSR3Q6P9H4 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC23.44■■□□□ 1.34
CNKSR3Q6P9H4 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC23.44■■□□□ 1.34
CNKSR3Q6P9H4 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
CNKSR3Q6P9H4 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
CNKSR3Q6P9H4 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
CNKSR3Q6P9H4 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
CNKSR3Q6P9H4 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC23.43■■□□□ 1.34
CNKSR3Q6P9H4 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
CNKSR3Q6P9H4 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
CNKSR3Q6P9H4 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
CNKSR3Q6P9H4 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC23.43■■□□□ 1.34
CNKSR3Q6P9H4 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
CNKSR3Q6P9H4 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC23.42■■□□□ 1.34
CNKSR3Q6P9H4 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC23.42■■□□□ 1.34
CNKSR3Q6P9H4 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC23.42■■□□□ 1.34
CNKSR3Q6P9H4 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC23.42■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms